Detailed information NTG0130791

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IX92_RS15090
• Genome accession: NZ_CP009617
• Coordinates: 3230897..3231904 (-)
• Length: 335 a.a.
• NCBI ID: WP_043009478.1
• Uniprot ID: A0AAN0SD60
• Organism: Vibrio coralliilyticus strain RE98
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3225897..3236904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX92_RS15060 (IX92_15060)	frdC	3226473..3226856 (+)	384	WP_038513905.1	fumarate reductase subunit FrdC	-
IX92_RS15065 (IX92_15065)	frdD	3226869..3227246 (+)	378	WP_043009474.1	fumarate reductase subunit FrdD	-
IX92_RS15070 (IX92_15070)	-	3227307..3227990 (-)	684	WP_043009475.1	nitroreductase family protein	-
IX92_RS15075 (IX92_15075)	hslU	3228155..3229489 (-)	1335	WP_043009476.1	HslU--HslV peptidase ATPase subunit	-
IX92_RS15080 (IX92_15080)	hslV	3229527..3230072 (-)	546	WP_006963336.1	ATP-dependent protease subunit HslV	-
IX92_RS15085 (IX92_15085)	-	3230234..3230782 (-)	549	WP_043009477.1	SPOR domain-containing protein	-
IX92_RS15090 (IX92_15090)	cytR	3230897..3231904 (-)	1008	WP_043009478.1	DNA-binding transcriptional regulator CytR	Regulator
IX92_RS15095 (IX92_15095)	priA	3232153..3234354 (-)	2202	WP_043009479.1	primosomal protein N'	-
IX92_RS15100 (IX92_15100)	rpmE	3234645..3234863 (+)	219	WP_006963341.1	50S ribosomal protein L31	-
IX92_RS15105 (IX92_15105)	-	3235115..3236392 (+)	1278	WP_006963342.1	malic enzyme-like NAD(P)-binding protein	-
IX92_RS15110 (IX92_15110)	metJ	3236480..3236800 (-)	321	WP_006963343.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36995.60 Da
• Isoelectric Point: 6.0455

>NTDB_id=130791 IX92_RS15090 WP_043009478.1 3230897..3231904(-) (cytR) [Vibrio coralliilyticus strain RE98]
MATMKDVAQLAGVSTATVSRALMNPEKVSSTTRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPSSAVLCQFRYQGYQQALRRAGISMNPNYCIYGDFSFEDGAKAVRQLLALPEPPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=130791 IX92_RS15090 WP_043009478.1 3230897..3231904(-) (cytR) [Vibrio coralliilyticus strain RE98]
ATGGCGACAATGAAGGATGTTGCTCAGCTAGCAGGCGTTTCAACTGCAACAGTATCGCGTGCTCTAATGAACCCGGAAAA
AGTATCTTCAACTACAAGGAAGCGAGTAGAAGATGCAGTATTAGAAGCCGGATATTCACCAAATTCTCTGGCGCGCAACC
TGCGCCGAAATGAGTCCAAAACCATAATTGCAATCATCCCGGATATTTGTGATCCCTACTACACAGAGATCATCCGTGGA
ATTGAAGACGCTGCGATGGAACATGGCTACATCGTGCTGCTGGGAGACAGTGGTCAGCAGAAAAAGCGTGAGAGTTCTTT
TGTCAATCTTGTCTTTACTAAGCAGGCCGATGGAATGTTGCTGCTTGGTACTGATCTGCCGTTTGACGTCAGCAAACCTG
AACAGAAAAACCTGCCACCTATGGTGATGGCGTGTGAGTTTGCACCTGAACTGGAGCTGCCAACGGTACACATTGATAAC
CTGACATCGGCATTTGAAGCGGTGAACTATCTTACGCAGATGGGTCACAAGCGCATTGCTCAGATTTCGGGCCCTAGTTC
TGCGGTACTATGCCAGTTCCGCTACCAAGGTTACCAGCAAGCGTTACGCCGAGCCGGCATTAGTATGAATCCGAATTACT
GTATCTACGGTGACTTCTCGTTTGAAGATGGTGCGAAAGCCGTCAGACAATTGTTGGCTTTACCTGAGCCGCCAACCGCG
ATTTTCTGTCACAACGATGCGATGGCCATCGGGGCAATTCAAGAAGCGAAGAAGCTGGGCTTGCGCGTCCCGCAAGACCT
GTCTGTCGTTGGCTTTGATGATATTCAGTTTGCTCAGTACTGCGATCCACCACTGACGACGATTTCTCAGCCGCGTTACG
AAATTGGCCGACAGGCGATGTTGATGATGCTTGAGTTGTTGCGCGGTCATGACGTTCGTGCTGGTTCTCGATTGCTAGAA
ACTCAGCTGGTTGTCAGGGAAAGTGCTGCTCCACCGCGAGTCATCTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.771	99.104	0.919
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896