Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | NF38_RS00275 | Genome accession | NZ_CP009610 |
| Coordinates | 57272..57784 (-) | Length | 170 a.a. |
| NCBI ID | WP_011272299.1 | Uniprot ID | Q4QLX0 |
| Organism | Haemophilus influenzae strain Hi375 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52272..62784
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NF38_RS00260 (NF38_00260) | comQ | 55593..55880 (-) | 288 | WP_021034778.1 | DUF5374 domain-containing protein | Machinery gene |
| NF38_RS00265 (NF38_00265) | comP | 55873..56556 (-) | 684 | WP_011272301.1 | DUF2572 family protein | Machinery gene |
| NF38_RS00270 (NF38_00270) | comO | 56553..57272 (-) | 720 | WP_011272300.1 | type II secretion system protein J | Machinery gene |
| NF38_RS00275 (NF38_00275) | comN | 57272..57784 (-) | 513 | WP_011272299.1 | type II secretion system protein | Machinery gene |
| NF38_RS00280 (NF38_00280) | suhB | 57984..58796 (+) | 813 | WP_011272298.1 | inositol-1-monophosphatase | - |
| NF38_RS00285 (NF38_00285) | nrfE | 58905..60812 (+) | 1908 | WP_038440290.1 | heme lyase NrfEFG subunit NrfE | - |
| NF38_RS00290 (NF38_00290) | - | 60812..61342 (+) | 531 | WP_005688388.1 | DsbE family thiol:disulfide interchange protein | - |
| NF38_RS00295 (NF38_00295) | nrfF | 61339..62481 (+) | 1143 | WP_005688390.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19874.13 Da Isoelectric Point: 8.7271
>NTDB_id=130677 NF38_RS00275 WP_011272299.1 57272..57784(-) (comN) [Haemophilus influenzae strain Hi375]
MQKGVTLVELLIGLAIISIVLSFVVPLWQTDSPKTILAKEQHRLYLFLRQIQVRAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGVTLVELLIGLAIISIVLSFVVPLWQTDSPKTILAKEQHRLYLFLRQIQVRAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=130677 NF38_RS00275 WP_011272299.1 57272..57784(-) (comN) [Haemophilus influenzae strain Hi375]
ATGCAGAAAGGTGTGACATTAGTGGAATTATTGATTGGATTAGCAATCATCAGCATTGTGCTGAGTTTTGTCGTGCCATT
ATGGCAAACCGATTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCTTGTATTTATTTCTACGACAAATTCAGGTTC
GTGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGGAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTGTGACATTAGTGGAATTATTGATTGGATTAGCAATCATCAGCATTGTGCTGAGTTTTGTCGTGCCATT
ATGGCAAACCGATTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCTTGTATTTATTTCTACGACAAATTCAGGTTC
GTGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGGAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
95.882 |
100 |
0.959 |