Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   BF33_RS01390 Genome accession   NZ_CP009605
Coordinates   161110..161904 (+) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus strain S2-8     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 156110..166904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BF33_RS01370 (BF33_190) argR 156949..157398 (+) 450 WP_001032581.1 arginine repressor ArgR -
  BF33_RS01375 (BF33_191) recN 157666..159405 (+) 1740 WP_000947757.1 DNA repair protein RecN Machinery gene
  BF33_RS01380 (BF33_192) spoIVB 159524..160822 (+) 1299 WP_002037056.1 SpoIVB peptidase -
  BF33_RS01390 (BF33_193) spo0A 161110..161904 (+) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  BF33_RS01395 (BF33_194) - 162202..163728 (+) 1527 WP_000218391.1 glycosyltransferase family 39 protein -
  BF33_RS01400 (BF33_195) - 163896..164042 (-) 147 WP_001247671.1 YycC family protein -
  BF33_RS01405 (BF33_196) - 164093..164821 (+) 729 WP_000172562.1 glycerophosphodiester phosphodiesterase -
  BF33_RS01410 (BF33_197) - 164870..165103 (-) 234 WP_001190185.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=130607 BF33_RS01390 WP_003161566.1 161110..161904(+) (spo0A) [Bacillus cereus strain S2-8]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=130607 BF33_RS01390 WP_003161566.1 161110..161904(+) (spo0A) [Bacillus cereus strain S2-8]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P52928

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818


Multiple sequence alignment