Detailed information NTG0130533

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AK39_RS27025
• Genome accession: NZ_CP009598
• Coordinates: 4860167..4861294 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470753.1
• Uniprot ID: Q6I535
• Organism: Bacillus anthracis str. V770-NP-1R
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4855167..4866294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AK39_RS27015 (AK39_5237)	gyrA	4855646..4858117 (-)	2472	WP_001282851.1	DNA gyrase subunit A	-
AK39_RS27020 (AK39_5238)	gyrB	4858206..4860128 (-)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AK39_RS27025 (AK39_5239)	recF	4860167..4861294 (-)	1128	WP_000470753.1	DNA replication/repair protein RecF	Machinery gene
AK39_RS27030 (AK39_5240)	yaaA	4861307..4861519 (-)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
AK39_RS27035 (AK39_5241)	dnaN	4861647..4862786 (-)	1140	WP_025707234.1	DNA polymerase III subunit beta	-
AK39_RS27040 (AK39_5242)	dnaA	4862965..4864305 (-)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
AK39_RS27045 (AK39_5243)	rpmH	4864870..4865004 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
AK39_RS27050 (AK39_5244)	rnpA	4865081..4865440 (+)	360	WP_000726628.1	ribonuclease P protein component	-
AK39_RS27055 (AK39_5245)	spoIIIJ	4865480..4866247 (+)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.71 Da
• Isoelectric Point: 6.9850

>NTDB_id=130533 AK39_RS27025 WP_000470753.1 4860167..4861294(-) (recF) [Bacillus anthracis str. V770-NP-1R]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=130533 AK39_RS27025 WP_000470753.1 4860167..4861294(-) (recF) [Bacillus anthracis str. V770-NP-1R]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCGAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: Q6I535

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651