Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   BG11_RS28245 Genome accession   NZ_CP009596
Coordinates   5034401..5034835 (+) Length   144 a.a.
NCBI ID   WP_000811492.1    Uniprot ID   A0A0G8EA73
Organism   Bacillus cereus strain 3a     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 5029401..5039835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG11_RS28225 (BG11_5224) - 5030290..5031453 (-) 1164 WP_000434590.1 aminotransferase A -
  BG11_RS28230 (BG11_5225) - 5031576..5031776 (-) 201 WP_000929284.1 hypothetical protein -
  BG11_RS28235 (BG11_5226) kinB 5032087..5033361 (+) 1275 WP_000420390.1 sporulation sensor histidine kinase KinB -
  BG11_RS28240 (BG11_5227) - 5033415..5034164 (-) 750 WP_000388464.1 DUF3967 domain-containing protein -
  BG11_RS28245 (BG11_5228) nucA/comI 5034401..5034835 (+) 435 WP_000811492.1 DNA-entry nuclease Machinery gene
  BG11_RS28250 (BG11_5229) comJ 5034872..5035261 (+) 390 WP_000424033.1 competence protein ComJ -
  BG11_RS28255 (BG11_5230) metE 5035298..5037586 (-) 2289 WP_001007635.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  BG11_RS28265 (BG11_5231) - 5038515..5039072 (-) 558 WP_000062080.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16012.35 Da        Isoelectric Point: 8.4331

>NTDB_id=130489 BG11_RS28245 WP_000811492.1 5034401..5034835(+) (nucA/comI) [Bacillus cereus strain 3a]
MKQLKGIIISIIAILSILVAVYEVLVPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=130489 BG11_RS28245 WP_000811492.1 5034401..5034835(+) (nucA/comI) [Bacillus cereus strain 3a]
ATGAAGCAATTAAAAGGTATTATAATTTCAATTATTGCAATTCTTTCTATTTTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGAGATATCCAGAAACAGGGA
AACATATTACGGATGCGATAAAGGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGCGCTGCGGATAGAAGAAAG
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATCGAATATATAAGTCCAGCAGATAACCGCGGAGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0G8EA73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

70.796

78.472

0.556

Multiple sequence alignment