Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BG11_RS13920 | Genome accession | NZ_CP009596 |
| Coordinates | 2354195..2354518 (+) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus cereus strain 3a | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 2349195..2359518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG11_RS13905 (BG11_2391) | - | 2349711..2351078 (-) | 1368 | WP_000116798.1 | aldehyde dehydrogenase | - |
| BG11_RS13910 (BG11_2392) | inhA1 | 2351250..2353637 (-) | 2388 | WP_001035926.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| BG11_RS13915 | - | 2353981..2354115 (+) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| BG11_RS13920 (BG11_2393) | sinR | 2354195..2354518 (+) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| BG11_RS13925 (BG11_2394) | calY | 2354594..2355187 (-) | 594 | WP_000053731.1 | biofilm matrix protein CalY | - |
| BG11_RS13930 (BG11_2395) | - | 2355585..2356451 (-) | 867 | WP_000917469.1 | DUF4047 domain-containing protein | - |
| BG11_RS13935 (BG11_2396) | - | 2356613..2357200 (-) | 588 | WP_000172840.1 | CalY family protein | - |
| BG11_RS13940 (BG11_2397) | sipW | 2357263..2357832 (-) | 570 | WP_000767813.1 | signal peptidase I SipW | - |
| BG11_RS13945 (BG11_2398) | - | 2358024..2359310 (-) | 1287 | WP_000247011.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=130453 BG11_RS13920 WP_000578878.1 2354195..2354518(+) (sinR) [Bacillus cereus strain 3a]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=130453 BG11_RS13920 WP_000578878.1 2354195..2354518(+) (sinR) [Bacillus cereus strain 3a]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |