Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | BG01_RS08240 | Genome accession | NZ_CP009544 |
| Coordinates | 1230772..1231551 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain BA1015 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1191950..1265873 | 1230772..1231551 | within | 0 |
Gene organization within MGE regions
Location: 1191950..1265873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG01_RS08050 (BG01_1337) | rsmB | 1192108..1193442 (+) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| BG01_RS08055 (BG01_1338) | rlmN | 1193447..1194535 (+) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| BG01_RS08060 (BG01_1339) | - | 1194540..1195292 (+) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| BG01_RS08065 (BG01_1340) | prkC | 1195301..1197274 (+) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| BG01_RS08070 (BG01_1341) | rsgA | 1197543..1198424 (+) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| BG01_RS08075 (BG01_1342) | rpe | 1198427..1199071 (+) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| BG01_RS08080 (BG01_1343) | - | 1199171..1199851 (+) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| BG01_RS08085 | spoVM | 1199918..1199998 (+) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| BG01_RS08090 (BG01_1344) | rpmB | 1200071..1200259 (-) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| BG01_RS08095 (BG01_1345) | - | 1200638..1201000 (+) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| BG01_RS08100 (BG01_1346) | - | 1201023..1202699 (+) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| BG01_RS08105 (BG01_1347) | recG | 1202989..1205037 (+) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| BG01_RS08110 (BG01_1348) | fapR | 1205126..1205719 (+) | 594 | WP_000747352.1 | transcription factor FapR | - |
| BG01_RS08115 (BG01_1349) | plsX | 1205716..1206708 (+) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| BG01_RS08120 (BG01_1350) | fabD | 1206723..1207667 (+) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| BG01_RS08125 (BG01_1351) | fabG | 1207667..1208407 (+) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| BG01_RS08130 (BG01_1352) | acpP | 1208477..1208710 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| BG01_RS08135 (BG01_1353) | rncS | 1208769..1209506 (+) | 738 | WP_001146873.1 | ribonuclease III | - |
| BG01_RS08140 (BG01_1354) | smc | 1209653..1213222 (+) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| BG01_RS08145 (BG01_1355) | ftsY | 1213238..1214227 (+) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| BG01_RS08150 (BG01_1356) | - | 1214360..1214692 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| BG01_RS08155 (BG01_1357) | ffh | 1214705..1216054 (+) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| BG01_RS08160 (BG01_1358) | rpsP | 1216155..1216427 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| BG01_RS08165 (BG01_1359) | - | 1216442..1216669 (+) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| BG01_RS08170 (BG01_1360) | rimM | 1216790..1217305 (+) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| BG01_RS08175 (BG01_1361) | trmD | 1217305..1218039 (+) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BG01_RS08180 (BG01_1362) | rplS | 1218186..1218530 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| BG01_RS08185 (BG01_1363) | lepB | 1218632..1219183 (+) | 552 | WP_000711857.1 | signal peptidase I | - |
| BG01_RS08190 (BG01_1364) | ylqF | 1219204..1220094 (+) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| BG01_RS08195 (BG01_1365) | rnhB | 1220146..1220919 (+) | 774 | WP_025706620.1 | ribonuclease HII | - |
| BG01_RS08200 (BG01_1366) | sucC | 1221113..1222273 (+) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BG01_RS08205 (BG01_1367) | sucD | 1222294..1223196 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| BG01_RS08210 (BG01_1368) | dprA | 1223518..1224152 (+) | 635 | Protein_1314 | DNA-processing protein DprA | - |
| BG01_RS08215 (BG01_1369) | topA | 1224297..1226375 (+) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| BG01_RS08220 (BG01_1370) | trmFO | 1226426..1227730 (+) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| BG01_RS08225 (BG01_1371) | xerC | 1227796..1228695 (+) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| BG01_RS08230 (BG01_1372) | hslV | 1228738..1229280 (+) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| BG01_RS08235 (BG01_1373) | hslU | 1229303..1230694 (+) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| BG01_RS08240 (BG01_1374) | codY | 1230772..1231551 (+) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| BG01_RS08245 (BG01_1375) | rpsB | 1231901..1232602 (+) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| BG01_RS08250 (BG01_1376) | tsf | 1232706..1233593 (+) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| BG01_RS08255 (BG01_1377) | pyrH | 1233660..1234382 (+) | 723 | WP_000042663.1 | UMP kinase | - |
| BG01_RS08260 (BG01_1378) | frr | 1234385..1234942 (+) | 558 | WP_000531503.1 | ribosome recycling factor | - |
| BG01_RS08265 (BG01_1379) | uppS | 1235028..1235804 (+) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| BG01_RS08270 (BG01_1380) | cdsA | 1235822..1236613 (+) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| BG01_RS08275 (BG01_1381) | dxr | 1236637..1237779 (+) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| BG01_RS08280 (BG01_1382) | rseP | 1237796..1239052 (+) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| BG01_RS08285 (BG01_1383) | - | 1239162..1240862 (+) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| BG01_RS08290 (BG01_1384) | - | 1240987..1245288 (+) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| BG01_RS08295 (BG01_1385) | rimP | 1245621..1246091 (+) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| BG01_RS08300 (BG01_1386) | nusA | 1246109..1247215 (+) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| BG01_RS08305 (BG01_1387) | rnpM | 1247227..1247499 (+) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| BG01_RS08310 (BG01_1388) | - | 1247500..1247811 (+) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| BG01_RS08315 (BG01_1389) | infB | 1247816..1249876 (+) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| BG01_RS08320 (BG01_1390) | - | 1249873..1250154 (+) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| BG01_RS08325 (BG01_1391) | rbfA | 1250170..1250526 (+) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| BG01_RS08330 (BG01_1392) | truB | 1250613..1251536 (+) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| BG01_RS08335 (BG01_1393) | ribF | 1251580..1252551 (+) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| BG01_RS08340 (BG01_1394) | rpsO | 1252652..1252921 (+) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| BG01_RS08345 (BG01_1395) | pnp | 1253082..1255220 (+) | 2139 | WP_000076733.1 | polyribonucleotide nucleotidyltransferase | - |
| BG01_RS08350 (BG01_1396) | - | 1255372..1256271 (+) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| BG01_RS08355 (BG01_1397) | - | 1256358..1257599 (+) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| BG01_RS08360 (BG01_1398) | - | 1257726..1257977 (+) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| BG01_RS08365 (BG01_1399) | dpaA | 1258252..1259154 (+) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| BG01_RS08370 (BG01_1400) | dpaB | 1259151..1259750 (+) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| BG01_RS08375 (BG01_1401) | asd | 1259901..1260947 (+) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| BG01_RS08380 (BG01_1402) | dapG | 1260971..1262203 (+) | 1233 | WP_000692470.1 | aspartate kinase | - |
| BG01_RS08385 (BG01_1403) | dapA | 1262215..1263093 (+) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| BG01_RS08395 (BG01_1404) | - | 1263859..1265529 (+) | 1671 | WP_000823085.1 | ribonuclease J | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=130076 BG01_RS08240 WP_000421288.1 1230772..1231551(+) (codY) [Bacillus anthracis strain BA1015]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=130076 BG01_RS08240 WP_000421288.1 1230772..1231551(+) (codY) [Bacillus anthracis strain BA1015]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |