Detailed information NTG0129759

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: AB831_RS15395
• Genome accession: NZ_CP011884
• Coordinates: 3071190..3073394 (+)
• Length: 734 a.a.
• NCBI ID: WP_021449555.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain MAVP-Q
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3066190..3078394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB831_RS15355 (AB831_14435)	rplV	3066859..3067191 (-)	333	WP_005383164.1	50S ribosomal protein L22	-
AB831_RS15360 (AB831_14440)	rpsS	3067202..3067480 (-)	279	WP_004394525.1	30S ribosomal protein S19	-
AB831_RS15365 (AB831_14445)	rplB	3067502..3068326 (-)	825	WP_005489461.1	50S ribosomal protein L2	-
AB831_RS15370 (AB831_14450)	rplW	3068342..3068644 (-)	303	WP_004398471.1	50S ribosomal protein L23	-
AB831_RS15375 (AB831_14455)	rplD	3068641..3069243 (-)	603	WP_005379556.1	50S ribosomal protein L4	-
AB831_RS15380 (AB831_14460)	rplC	3069261..3069890 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
AB831_RS15385 (AB831_14465)	rpsJ	3069905..3070216 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
AB831_RS15390 (AB831_14470)	rpmE	3070674..3070895 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
AB831_RS15395 (AB831_14475)	priA	3071190..3073394 (+)	2205	WP_021449555.1	primosomal protein N'	Machinery gene
AB831_RS15400 (AB831_14480)	cytR	3073688..3074734 (+)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
AB831_RS15405 (AB831_14485)	ftsN	3074910..3075455 (+)	546	WP_024703418.1	cell division protein FtsN	-
AB831_RS15410 (AB831_14490)	hslV	3075619..3076170 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
AB831_RS15415 (AB831_14495)	hslU	3076194..3077525 (+)	1332	WP_021449544.1	HslU--HslV peptidase ATPase subunit	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82273.80 Da
• Isoelectric Point: 8.5674

>NTDB_id=129759 AB831_RS15395 WP_021449555.1 3071190..3073394(+) (priA) [Vibrio parahaemolyticus strain MAVP-Q]
MRPSIARVALPVPLDKQFDYAIPGYLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKDQLKPIKAVLDSQPVWSEKLYS
LLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITESGKDKLMQGLDRRAVKQQKVLQMLVNGALPHQEFVDQ
EIASTVLKSLEDKGWIERIEKKPVITQWGQHVECDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGIIIGTRSALLAPFADLGIIIV
DEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTTNKVLDVKGQYL
ESGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALDSIRKGEYQILIGTQMLAKGHHFPNVTLVALLDV
DGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLF
KAEANQSEIVEDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS

Nucleotide

• Length: 2205 bp

>NTDB_id=129759 AB831_RS15395 WP_021449555.1 3071190..3073394(+) (priA) [Vibrio parahaemolyticus strain MAVP-Q]
ATGCGTCCATCCATTGCTAGAGTGGCACTGCCCGTACCTCTCGACAAACAATTTGACTATGCCATCCCAGGATACCTGTT
TCCTATCATTGGCGGGCGCGTATCCGTACCTTTTGGACGTCAAACGTTAGTTGGCATCGTCACCGCGATGGTTAATCACT
CGGACTTTCCCAAAGATCAACTCAAGCCAATCAAAGCGGTTCTTGATTCTCAGCCGGTATGGTCTGAAAAGCTTTATTCG
TTGCTGACTTGGTGCAGCCAATTCTACCAGTACCCACTTGGAGATACGCTACACAATGCGATGCCGGCAGCTCTGCGTAA
AGGAAAGCCTGCAGATTTTGCGACGCTACAAGAGTGGCAAATTACCGAATCCGGTAAAGACAAGCTGATGCAAGGGCTTG
ATCGTCGAGCGGTCAAACAACAGAAGGTCTTGCAAATGTTGGTTAACGGCGCTTTGCCTCACCAGGAATTTGTCGACCAA
GAGATAGCCTCAACAGTACTAAAGTCTTTAGAAGATAAAGGCTGGATTGAACGTATCGAGAAGAAGCCTGTAATCACCCA
GTGGGGACAGCACGTTGAATGCGACGTCGAGAAGCCAAAGCTCAACCACGAACAAGCGCTGGCTATTGCGAGTGTAAATA
GCCAAACAGGTTTTGCTTGCTATTTATTAGAGGGCGTCACGGGCTCAGGTAAGACAGAAGTGTACCTTAACCTGATCAAG
CCGGTCTTAGAGAAAGGTAAACAAGCTTTGGTTTTAGTACCAGAGATTGGCTTAACACCGCAAACCATCAACCGCTTTAA
ACGCCGTTTTAATGTGCCAGTTGACGTTATCCACTCCGGATTAAACGAGACGGAGCGTCTGAATGCGTGGCTTTCTGCAC
GCGACAAAGCGGCCGGAATCATTATCGGCACACGCTCTGCCCTACTCGCACCTTTTGCTGATCTCGGGATTATCATTGTG
GACGAGGAACATGACACCTCTTACAAACAGCAAGATAGCTTGCGTTATCATGCACGCGATGTTGCTGTAATGCGCGCTCA
TAAAGAACAAGTTCCGATTGTTCTGGGCTCAGCCACACCTGCACTGGAGACATTGCACAATGCCTTGTCAGGCAAGTATC
ACCATTTAACCCTGACCCAACGCGCAGGCTCTGCGGTTCCTACTACTAATAAAGTGCTCGACGTCAAAGGTCAGTATTTA
GAAAGTGGTTTATCTGCCCCATTGATTGCGGAAATGCGCAAACACCTTAAAGCAGGCAATCAGGTGATGCTGTTTCTTAA
CCGTCGTGGTTTCTCCCCTGCTCTCATGTGTCATGAATGTGGTTGGATTGCCGAATGCAAACGTTGTGATGCTTATTACA
CCTTCCACCAATACAGCAATGAGATTCGCTGCCACCATTGTGGCTCGCAGCAACCAGTAATTCATCAGTGTCAGGGCTGT
GGTTCAACTCAACTGGTTACCGTTGGTGTCGGTACCGAACAGTTAGAACAACAATTGGCACAACTGTTCCCCGAATACAA
AGCCATCCGCATCGACAGGGATAGCACGCGCCGTAAAGGCAGCTTAGAAGACGCGTTGGACTCTATCCGCAAAGGTGAAT
ATCAAATTTTGATTGGCACTCAAATGCTAGCTAAGGGACACCATTTCCCCAATGTAACGCTCGTTGCCTTGCTAGATGTT
GATGGCTCTCTATATAGTAGCGACTTTCGCGCCTCCGAAAGATTAGCGCAGTTATTCATTCAAGTCGCAGGGCGAGCCGG
ACGTGCAAGTAAGCCGGGGGAAGTGGTTTTACAGACTCACCATCCTGAGCACAGTTTGTTGCAAGCCTTATTGGAAAAAG
ACTACCGACACTTCGCTATGACGGCATTAGAAGAACGTAAACTGGCGCAGTTGCCACCTTACAGTTTCCTGACTCTATTT
AAAGCCGAAGCGAATCAGAGCGAGATCGTAGAAGATTTTCTGCGCCAAGTTCGCTTTACCTTAGAATCTCACCCTTTGTT
TGACGACACCTGCATGGTGCTTGGTCCAACACCATCGCCCCTCGCCAAACGCGCAGGCAAATACCGTTGGCAGCTGTTAC
TCCAAACCCAGCACCGTTCATTAATGCAAAAGTTATTAACCAGTGCCAAACCTGCTATTGAGTTGTTGCCTAATGCCAAA
AAAGTTCGCTGGAATTTAGACATAGAACCACAAGATCTCAGCTAG

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (633-730)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (446-472)

• DEAD/DEAH box helicase (DEAD) (220-365)

• Helicase conserved C-terminal domain (Helicase_C) (500-589)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	43.649	100	0.44
priA	Bacillus subtilis subsp. subtilis str. 168	34.005	100	0.368