Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   BF26_RS15005 Genome accession   NZ_CP009476
Coordinates   2719719..2720003 (+) Length   94 a.a.
NCBI ID   WP_000843035.1    Uniprot ID   A0A6L7HTM5
Organism   Bacillus anthracis strain Pasteur     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 2714719..2725003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BF26_RS14990 (BF26_2926) rnmV 2715541..2716098 (-) 558 WP_033649227.1 ribonuclease M5 -
  BF26_RS14995 (BF26_2927) - 2716313..2717080 (-) 768 WP_000895823.1 TatD family hydrolase -
  BF26_RS15000 (BF26_2928) metG 2717246..2719228 (-) 1983 WP_000134128.1 methionine--tRNA ligase -
  BF26_RS15005 (BF26_2929) abrB 2719719..2720003 (+) 285 WP_000843035.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  BF26_RS15010 (BF26_2930) rsmI 2720024..2720899 (-) 876 WP_000267808.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  BF26_RS15015 (BF26_2931) - 2720868..2721158 (-) 291 WP_000414342.1 GIY-YIG nuclease family protein -
  BF26_RS15020 (BF26_2932) - 2721145..2721885 (-) 741 WP_001055363.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  BF26_RS15025 (BF26_2933) yabA 2722006..2722356 (-) 351 WP_000412056.1 DNA replication initiation control protein YabA -
  BF26_RS15030 (BF26_2934) - 2722371..2723198 (-) 828 WP_000272429.1 stage 0 sporulation family protein -
  BF26_RS15035 (BF26_2935) holB 2723204..2724187 (-) 984 WP_000169560.1 DNA polymerase III subunit delta' -
  BF26_RS15040 (BF26_2936) tmk 2724223..2724849 (-) 627 WP_000677237.1 dTMP kinase -

Sequence


Protein


Download         Length: 94 a.a.        Molecular weight: 10550.27 Da        Isoelectric Point: 4.7174

>NTDB_id=129707 BF26_RS15005 WP_000843035.1 2719719..2720003(+) (abrB) [Bacillus anthracis strain Pasteur]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLFLAEGKIILSKEGAE
QILNELQDYIETAK

Nucleotide


Download         Length: 285 bp        

>NTDB_id=129707 BF26_RS15005 WP_000843035.1 2719719..2720003(+) (abrB) [Bacillus anthracis strain Pasteur]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATTTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6L7HTM5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

85.106

100

0.851


Multiple sequence alignment