Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ABU16_RS20375 Genome accession   NZ_CP011882
Coordinates   3926596..3927291 (-) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis strain TO-A JPC     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3921596..3932291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABU16_RS20355 (ABU16_4064) yttA 3922023..3922769 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  ABU16_RS20360 (ABU16_4065) bceB 3922806..3924746 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  ABU16_RS20365 (ABU16_4066) bceA 3924736..3925497 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  ABU16_RS20370 (ABU16_4067) bceS 3925599..3926603 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  ABU16_RS20375 (ABU16_4068) braR 3926596..3927291 (-) 696 WP_003229133.1 two-component response regulator BceR Regulator
  ABU16_RS20380 (ABU16_4069) ytrF 3927388..3928698 (-) 1311 WP_029318285.1 ABC transporter permease YtrF -
  ABU16_RS20385 (ABU16_4070) ytrE 3928688..3929383 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  ABU16_RS20390 (ABU16_4071) ytrD 3929398..3930375 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  ABU16_RS20395 (ABU16_4072) ytrC 3930405..3931391 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  ABU16_RS20400 (ABU16_4073) ytrB 3931385..3932263 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=129682 ABU16_RS20375 WP_003229133.1 3926596..3927291(-) (braR) [Bacillus subtilis strain TO-A JPC]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=129682 ABU16_RS20375 WP_003229133.1 3926596..3927291(-) (braR) [Bacillus subtilis strain TO-A JPC]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377