Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABU16_RS04790 Genome accession   NZ_CP011882
Coordinates   942533..943381 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain TO-A JPC     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 937533..948381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABU16_RS04770 (ABU16_0980) yyaE 938046..940049 (-) 2004 WP_003244290.1 molybdopterin-dependent oxidoreductase -
  ABU16_RS04775 (ABU16_0981) yyzM 940100..940306 (-) 207 WP_003226838.1 DUF951 family protein -
  ABU16_RS04780 (ABU16_0982) - 940400..941416 (-) 1017 WP_010886647.1 membrane protein -
  ABU16_RS04785 (ABU16_0983) yyaC 941876..942493 (+) 618 WP_003243890.1 spore protease YyaC -
  ABU16_RS04790 (ABU16_0984) spo0J 942533..943381 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  ABU16_RS04795 (ABU16_0985) soj 943374..944135 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  ABU16_RS04800 (ABU16_0986) yyaB 944383..944823 (+) 441 WP_019712630.1 PH domain-containing protein -
  ABU16_RS04805 (ABU16_0987) noc 944874..945725 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  ABU16_RS04810 (ABU16_0988) rsmG 945847..946566 (-) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=129561 ABU16_RS04790 WP_003226832.1 942533..943381(-) (spo0J) [Bacillus subtilis strain TO-A JPC]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=129561 ABU16_RS04790 WP_003226832.1 942533..943381(-) (spo0J) [Bacillus subtilis strain TO-A JPC]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGTTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGATTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTAAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAAAGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387