Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ABU16_RS02565 | Genome accession | NZ_CP011882 |
| Coordinates | 510732..511865 (-) | Length | 377 a.a. |
| NCBI ID | WP_003227715.1 | Uniprot ID | P70962 |
| Organism | Bacillus subtilis strain TO-A JPC | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 505732..516865
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABU16_RS02530 (ABU16_0520) | ywnA | 505908..506309 (-) | 402 | WP_003227734.1 | Rrf2 family transcriptional regulator | - |
| ABU16_RS02535 (ABU16_0521) | ureC | 506444..508153 (-) | 1710 | WP_003243090.1 | urease subunit alpha | - |
| ABU16_RS02540 (ABU16_0522) | ureB | 508150..508524 (-) | 375 | WP_003227726.1 | urease subunit beta | - |
| ABU16_RS02545 (ABU16_0523) | ureA | 508521..508838 (-) | 318 | WP_003227724.1 | urease subunit gamma | - |
| ABU16_RS21425 | - | 509019..509183 (-) | 165 | WP_015649919.1 | hypothetical protein | - |
| ABU16_RS22960 | - | 509455..509623 (-) | 169 | Protein_509 | urea ABC transporter substrate-binding protein | - |
| ABU16_RS02555 (ABU16_0525) | csbD | 509836..510024 (-) | 189 | WP_003227718.1 | stress response protein CsbD | - |
| ABU16_RS02560 (ABU16_0526) | - | 510097..510576 (-) | 480 | WP_003244390.1 | hypothetical protein | - |
| ABU16_RS02565 (ABU16_0528) | rapC | 510732..511865 (-) | 1134 | WP_003227715.1 | response regulator aspartate phosphatase RapB | Regulator |
| ABU16_RS02570 (ABU16_0529) | moaA | 512057..513082 (-) | 1026 | WP_003243488.1 | GTP 3',8-cyclase MoaA | - |
| ABU16_RS02575 (ABU16_0530) | fdhD | 513098..513886 (-) | 789 | WP_003227709.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| ABU16_RS21435 (ABU16_0531) | - | 514132..514293 (-) | 162 | WP_003227706.1 | hypothetical protein | - |
| ABU16_RS02585 (ABU16_0532) | ywmD | 514387..515061 (-) | 675 | WP_003243553.1 | VWA domain-containing protein | - |
| ABU16_RS22290 (ABU16_0533) | - | 515114..515254 (-) | 141 | WP_003227702.1 | hypothetical protein | - |
| ABU16_RS02595 (ABU16_0534) | ywmC | 515385..516068 (-) | 684 | WP_003227700.1 | VWA domain-containing protein | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 45037.17 Da Isoelectric Point: 4.8005
>NTDB_id=129548 ABU16_RS02565 WP_003227715.1 510732..511865(-) (rapC) [Bacillus subtilis strain TO-A JPC]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
Nucleotide
Download Length: 1134 bp
>NTDB_id=129548 ABU16_RS02565 WP_003227715.1 510732..511865(-) (rapC) [Bacillus subtilis strain TO-A JPC]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAACTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCCGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAACTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCCGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
42.632 |
100 |
0.43 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.667 |
99.469 |
0.424 |