Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | LH23_RS12790 | Genome accession | NZ_CP009458 |
| Coordinates | 2743257..2743886 (+) | Length | 209 a.a. |
| NCBI ID | WP_039291590.1 | Uniprot ID | A0A1X7LU94 |
| Organism | Cedecea neteri strain M006 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2738257..2748886
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH23_RS12775 (LH23_12970) | - | 2738621..2740375 (-) | 1755 | WP_039296640.1 | AAA family ATPase | - |
| LH23_RS12780 (LH23_12975) | matP | 2740552..2741004 (+) | 453 | WP_008461251.1 | macrodomain Ter protein MatP | - |
| LH23_RS12785 (LH23_12980) | ompA | 2741096..2742172 (-) | 1077 | WP_039291587.1 | porin OmpA | - |
| LH23_RS23460 | sulA | 2742530..2743039 (-) | 510 | WP_071842718.1 | SOS-induced cell division inhibitor SulA | - |
| LH23_RS12790 (LH23_12985) | sxy/tfoX | 2743257..2743886 (+) | 630 | WP_039291590.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| LH23_RS12795 (LH23_12990) | yccS | 2743871..2746009 (-) | 2139 | WP_039296643.1 | YccS family putative transporter | - |
| LH23_RS12800 (LH23_12995) | - | 2746022..2746468 (-) | 447 | WP_039291593.1 | YccF domain-containing protein | - |
| LH23_RS12805 (LH23_13000) | helD | 2746599..2748653 (+) | 2055 | WP_039291595.1 | DNA helicase IV | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24154.23 Da Isoelectric Point: 10.1786
>NTDB_id=129454 LH23_RS12790 WP_039291590.1 2743257..2743886(+) (sxy/tfoX) [Cedecea neteri strain M006]
MKKVTFIRIHKSREYLSSLGKIGCRPLFGGYSLTVDGVVFAMVAEGELYLRACEQCAEYFIQKSAPPLMYSKRGLPVALN
YYRVDEELWENPEKLVQLSSLALRSAQREKKQIKIRSRRLKDLPNLSLNIEVMLREVGINDPQTLQLFGAKRSWLKLRNT
RKTVGIKVLLSLAGAIRGVHEAVLPAEVRKELTEWWRCYEQRQQAYSEH
MKKVTFIRIHKSREYLSSLGKIGCRPLFGGYSLTVDGVVFAMVAEGELYLRACEQCAEYFIQKSAPPLMYSKRGLPVALN
YYRVDEELWENPEKLVQLSSLALRSAQREKKQIKIRSRRLKDLPNLSLNIEVMLREVGINDPQTLQLFGAKRSWLKLRNT
RKTVGIKVLLSLAGAIRGVHEAVLPAEVRKELTEWWRCYEQRQQAYSEH
Nucleotide
Download Length: 630 bp
>NTDB_id=129454 LH23_RS12790 WP_039291590.1 2743257..2743886(+) (sxy/tfoX) [Cedecea neteri strain M006]
ATGAAAAAGGTGACATTTATTAGAATTCATAAATCACGGGAATATCTTTCGTCACTGGGGAAAATCGGTTGTCGACCGCT
ATTTGGTGGTTATAGTCTGACCGTTGACGGCGTGGTGTTTGCTATGGTGGCTGAAGGTGAACTTTATCTGCGGGCTTGTG
AACAGTGCGCGGAGTATTTTATCCAAAAATCGGCGCCTCCTCTGATGTACAGTAAACGCGGGCTTCCTGTCGCGCTGAAT
TACTACCGTGTCGATGAAGAACTTTGGGAAAATCCGGAAAAACTCGTCCAGCTCTCTTCTCTGGCGTTAAGAAGCGCCCA
ACGTGAGAAGAAACAAATCAAAATACGTTCTCGTCGCCTTAAAGACCTCCCCAATCTTTCCCTGAATATTGAAGTTATGC
TTCGTGAGGTGGGGATCAATGATCCACAAACGCTTCAACTCTTTGGTGCCAAACGGTCATGGCTAAAATTACGCAACACC
AGGAAAACGGTAGGTATTAAAGTCCTGCTCTCGCTTGCAGGTGCTATTCGTGGTGTTCATGAGGCGGTACTGCCTGCTGA
GGTTCGGAAAGAATTGACGGAATGGTGGCGCTGCTATGAGCAGCGCCAGCAAGCTTACTCTGAACACTGA
ATGAAAAAGGTGACATTTATTAGAATTCATAAATCACGGGAATATCTTTCGTCACTGGGGAAAATCGGTTGTCGACCGCT
ATTTGGTGGTTATAGTCTGACCGTTGACGGCGTGGTGTTTGCTATGGTGGCTGAAGGTGAACTTTATCTGCGGGCTTGTG
AACAGTGCGCGGAGTATTTTATCCAAAAATCGGCGCCTCCTCTGATGTACAGTAAACGCGGGCTTCCTGTCGCGCTGAAT
TACTACCGTGTCGATGAAGAACTTTGGGAAAATCCGGAAAAACTCGTCCAGCTCTCTTCTCTGGCGTTAAGAAGCGCCCA
ACGTGAGAAGAAACAAATCAAAATACGTTCTCGTCGCCTTAAAGACCTCCCCAATCTTTCCCTGAATATTGAAGTTATGC
TTCGTGAGGTGGGGATCAATGATCCACAAACGCTTCAACTCTTTGGTGCCAAACGGTCATGGCTAAAATTACGCAACACC
AGGAAAACGGTAGGTATTAAAGTCCTGCTCTCGCTTGCAGGTGCTATTCGTGGTGTTCATGAGGCGGTACTGCCTGCTGA
GGTTCGGAAAGAATTGACGGAATGGTGGCGCTGCTATGAGCAGCGCCAGCAAGCTTACTCTGAACACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
54.359 |
93.301 |
0.507 |