Detailed information NTG0129365

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: FORC16_RS12860
• Genome accession: NZ_CP011775
• Coordinates: 2822654..2825476 (+)
• Length: 940 a.a.
• NCBI ID: WP_060530668.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_016
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2817654..2830476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC16_RS12840 (FORC16_2530)	csrD	2817816..2819813 (-)	1998	WP_043877331.1	RNase E specificity factor CsrD	-
FORC16_RS12845 (FORC16_2531)	ssb	2819966..2820505 (-)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
FORC16_RS12850 (FORC16_2532)	qstR	2820805..2821452 (+)	648	WP_011079388.1	response regulator transcription factor	Regulator
FORC16_RS12855 (FORC16_2533)	galU	2821639..2822511 (+)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
FORC16_RS12860 (FORC16_2534)	uvrA	2822654..2825476 (+)	2823	WP_060530668.1	excinuclease ABC subunit UvrA	Machinery gene
FORC16_RS12865 (FORC16_2535)	-	2825543..2827306 (+)	1764	WP_045620601.1	PglL family O-oligosaccharyltransferase	-
FORC16_RS12870 (FORC16_2536)	-	2827371..2828492 (-)	1122	WP_011151256.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
FORC16_RS12875 (FORC16_2537)	lysC	2829007..2830356 (+)	1350	WP_039554802.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103983.46 Da
• Isoelectric Point: 6.5391

>NTDB_id=129365 FORC16_RS12860 WP_060530668.1 2822654..2825476(+) (uvrA) [Vibrio vulnificus strain FORC_016]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPDHKVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRGDLQQRLAESFETALELSGGIAVIAPMEGD
GEEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPERVIQDASLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHSPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCTSCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKEVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=129365 FORC16_RS12860 WP_060530668.1 2822654..2825476(+) (uvrA) [Vibrio vulnificus strain FORC_016]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAACATAAATCTCACCATTCCCCGAGATAAACTGAT
CGTTATTACGGGCTTATCCGGCTCAGGTAAGTCTTCTTTGGCATTTGACACTTTGTACGCAGAGGGTCAGCGACGTTATG
TGGAATCCCTGTCAGCCTACGCTCGCCAGTTTCTCTCTTTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCCATTTCTATCGAGCAAAAATCCACCTCGCACAACCCGCGTTCAACCGTTGGGACCATCACGGAAGTGTATGACTA
CCTTCGCCTACTGTATGCTCGCGTTGGTGAACCTCGCTGTCCTGACCACAAAGTCCCTTTAGCGGCTCAAACCATTAGCC
AAATGGTCGACAAAGTGCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTGAAAGAGCGCAAAGGC
GAGCACGTTAAAACATTAGAGAATCTTGCTGCTCAAGGTTTTATCCGTGCGCGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTGGCGATTTAC
AACAAAGGCTCGCAGAATCCTTTGAAACGGCACTGGAACTCTCAGGTGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGATCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCAGGTGCTTGTGGCACCTGTGATGGCCTCGGGGTACAGCAATATTTTGACCCAGAACGTGTGA
TTCAAGATGCCAGTTTAAGTCTTGCACAAGGGGCGATTCGTGGTTGGGATCAGAAGAACTATTACTATTTCCAAATGCTC
ACATCGCTGGCTGAGCATTACGATTTCGATTTACATTCCCCTTTTAATTCGCTTTCCAAACGCATCCAAGAGGTCATCTT
AAAAGGCTCAGGGCGCACTGAAATCGAATTTAAGTACATCAACGACCGAGGCGACATTCGTCTTAAACGCCATCCATTTG
AAGGTATTCTCAATACACTCGAGCGCCGTTATCGCGACACGGAATCGAACTCGGTACGAGAAGAGTTGGTGAAATATATC
TCCACCAAACCTTGCACCAGTTGTGGTGGAACGCGTCTGCGCCTAGAAGCACGCAACGTGTTTATTAATGACACGACATT
ACCACAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAACTCGAAGGGCAGCGAGCTCAAA
TTGCGGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAACGTTGGCCTCAATTATTTGAACCTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTGGCTAGTCAGATCGGTGCCGGTTTGGTTGGCGT
GATGTACGTGCTCGATGAACCATCAATAGGCCTTCACCAGCGTGACAATGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGATATTGGC
CCTGGTGCAGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTGAGCGGTGCCAAGCAGATTATTGTGCCGACTCAACGCACACCAAGAGATAAGAACAAAACCGTTGAGC
TCATTGGAGCCAGTGGCAACAACCTTAAAGAGGTCAATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCGGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACCCAACTCAATGGGGCGACCACAGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGTC
GCACACCGCGTTCAAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGTTGTTCTCCGGCACTCAGGAGTCT
CGTTCACGTGGCTACAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCATTTCCTACCCGATGTATATGTCCCCTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTAGAGATGACCGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGCAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.174	100	0.583
uvrA	Streptococcus pneumoniae TIGR4	58.174	100	0.583
uvrA	Streptococcus pneumoniae D39	58.174	100	0.583