Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | PODO_RS05970 | Genome accession | NZ_CP009428 |
| Coordinates | 1376736..1377683 (+) | Length | 315 a.a. |
| NCBI ID | WP_036681839.1 | Uniprot ID | A0A1R0X0A0 |
| Organism | Paenibacillus odorifer strain DSM 15391 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1371736..1382683
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PODO_RS05940 (PODO_06115) | - | 1372053..1373018 (+) | 966 | WP_038574185.1 | nitronate monooxygenase family protein | - |
| PODO_RS05945 (PODO_06120) | - | 1373104..1374198 (-) | 1095 | WP_036681827.1 | Xaa-Pro peptidase family protein | - |
| PODO_RS05950 (PODO_06125) | - | 1374424..1375266 (+) | 843 | WP_038569185.1 | SDR family oxidoreductase | - |
| PODO_RS05955 (PODO_06130) | - | 1375292..1375795 (+) | 504 | WP_036681829.1 | GNAT family N-acetyltransferase | - |
| PODO_RS05960 (PODO_06135) | - | 1375813..1376157 (-) | 345 | WP_036681832.1 | helix-turn-helix domain-containing protein | - |
| PODO_RS05965 (PODO_06140) | - | 1376247..1376507 (+) | 261 | WP_038569187.1 | YqkE family protein | - |
| PODO_RS05970 (PODO_06145) | ceuB | 1376736..1377683 (+) | 948 | WP_036681839.1 | ABC transporter permease | Machinery gene |
| PODO_RS05975 (PODO_06150) | - | 1377686..1378630 (+) | 945 | WP_036681842.1 | iron chelate uptake ABC transporter family permease subunit | - |
| PODO_RS05980 (PODO_06155) | - | 1378624..1379379 (+) | 756 | WP_038569188.1 | ABC transporter ATP-binding protein | - |
| PODO_RS05985 (PODO_06160) | - | 1379502..1380506 (+) | 1005 | WP_280513452.1 | siderophore ABC transporter substrate-binding protein | - |
| PODO_RS05990 (PODO_06165) | - | 1380673..1381176 (+) | 504 | WP_038569189.1 | sigma-70 family RNA polymerase sigma factor | - |
| PODO_RS05995 (PODO_06170) | - | 1381169..1382362 (+) | 1194 | WP_038569190.1 | anti-sigma factor | - |
Sequence
Protein
Download Length: 315 a.a. Molecular weight: 34506.70 Da Isoelectric Point: 10.0525
>NTDB_id=129220 PODO_RS05970 WP_036681839.1 1376736..1377683(+) (ceuB) [Paenibacillus odorifer strain DSM 15391]
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFHLTESQAQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLI
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYLFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKSLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFHLTESQAQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLI
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYLFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKSLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN
Nucleotide
Download Length: 948 bp
>NTDB_id=129220 PODO_RS05970 WP_036681839.1 1376736..1377683(+) (ceuB) [Paenibacillus odorifer strain DSM 15391]
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTTTCATTTATTTCTTTGTTTATAGGCGTTAAAGATATATCCCC
ATTAGATCTCTTTCATCTTACGGAATCTCAAGCACAGACCTTGCTGGTAAGCCGGATTCCCCGGTTAGCCGCATTGATTA
TCGCTGGAGTCAGCATGAGTATTGCCGGATTAATTATGCAACAGCTGTCACGCAATAAATTCGTCTCACCGACTACGGCA
GGGACGATGGATTCCGCAAAATTTGGTATTCTCGTATCCCTCATGTTATTCACAGGCGCAACGCCAATGCAGAAATTGCT
TGTTGCTTTTGTTTTTGCGCTATTGGGCACCTTTATTTTTATGAGAATCCTGGATCGGATCAAGTTCAAGGATAGTATTT
TTATCCCGCTGGTCGGACTCATGTTCGGCAACATTGTAGGCTCGATTACAACATTTTTTGCGTATAAAAATGATTTGATT
CAGAATATCTCATCTTGGATGCTTGGGGATTTCTCGACGATTATCAAAGGCCAATACGAATTAATTTATATCAGCATTCC
ACTTGTCATTCTGGCGTATCTCTTCGCTAATAAATTTACGGTAGCCGGTATGGGCGAGGATTTTTCCGTCAATCTTGGCA
TGAACTACAAAGCGGTGGTCAACGTGGGATTGGTAATTGTAGCGTTAATCTCTTCTGTTGTCATTTTAACCGTAGGTACG
ATTCCATTTCTGGGTCTAGTAGTACCTAACATTGTAACGTTGTACATAGGGGATAACCTCAAAAAAAGTCTGGCGCATAC
AGCCATTCTCGGAGCGGTGTTCCTCCTGTTCTGCGATATTCTGGGCAGGCTCATTATCTATCCATATGAAATATCAATCA
GTCTCACGGTAGGCGTCATCGGTAGTGGTCTATTTATCTACTTGCTGATGAGAAGAAAGGCGAACTAG
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTTTCATTTATTTCTTTGTTTATAGGCGTTAAAGATATATCCCC
ATTAGATCTCTTTCATCTTACGGAATCTCAAGCACAGACCTTGCTGGTAAGCCGGATTCCCCGGTTAGCCGCATTGATTA
TCGCTGGAGTCAGCATGAGTATTGCCGGATTAATTATGCAACAGCTGTCACGCAATAAATTCGTCTCACCGACTACGGCA
GGGACGATGGATTCCGCAAAATTTGGTATTCTCGTATCCCTCATGTTATTCACAGGCGCAACGCCAATGCAGAAATTGCT
TGTTGCTTTTGTTTTTGCGCTATTGGGCACCTTTATTTTTATGAGAATCCTGGATCGGATCAAGTTCAAGGATAGTATTT
TTATCCCGCTGGTCGGACTCATGTTCGGCAACATTGTAGGCTCGATTACAACATTTTTTGCGTATAAAAATGATTTGATT
CAGAATATCTCATCTTGGATGCTTGGGGATTTCTCGACGATTATCAAAGGCCAATACGAATTAATTTATATCAGCATTCC
ACTTGTCATTCTGGCGTATCTCTTCGCTAATAAATTTACGGTAGCCGGTATGGGCGAGGATTTTTCCGTCAATCTTGGCA
TGAACTACAAAGCGGTGGTCAACGTGGGATTGGTAATTGTAGCGTTAATCTCTTCTGTTGTCATTTTAACCGTAGGTACG
ATTCCATTTCTGGGTCTAGTAGTACCTAACATTGTAACGTTGTACATAGGGGATAACCTCAAAAAAAGTCTGGCGCATAC
AGCCATTCTCGGAGCGGTGTTCCTCCTGTTCTGCGATATTCTGGGCAGGCTCATTATCTATCCATATGAAATATCAATCA
GTCTCACGGTAGGCGTCATCGGTAGTGGTCTATTTATCTACTTGCTGATGAGAAGAAAGGCGAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
56.051 |
99.683 |
0.559 |