Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   M444_RS25630 Genome accession   NZ_CP011664
Coordinates   5860575..5861369 (-) Length   264 a.a.
NCBI ID   WP_008742948.1    Uniprot ID   A0ABZ1RJP0
Organism   Streptomyces sp. Mg1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5855575..5866369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M444_RS25615 (M444_25600) - 5855835..5856473 (+) 639 WP_008742945.1 GNAT family N-acetyltransferase -
  M444_RS25620 (M444_25605) - 5856603..5858480 (+) 1878 WP_008742946.1 IucA/IucC family siderophore biosynthesis protein -
  M444_RS25625 (M444_25610) - 5858533..5860503 (+) 1971 WP_037794556.1 ATP-dependent DNA helicase -
  M444_RS25630 (M444_25615) dinR/lexA 5860575..5861369 (-) 795 WP_008742948.1 transcriptional repressor LexA Regulator
  M444_RS25635 (M444_25620) nrdR 5861837..5862349 (+) 513 WP_008742949.1 transcriptional regulator NrdR -
  M444_RS25640 (M444_25625) - 5862479..5865364 (+) 2886 WP_008742950.1 vitamin B12-dependent ribonucleotide reductase -
  M444_RS43680 - 5865549..5865593 (+) 45 Protein_5133 hypothetical protein -
  M444_RS25645 (M444_25630) - 5865611..5866213 (+) 603 WP_250636754.1 DUF6215 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28575.37 Da        Isoelectric Point: 7.4240

>NTDB_id=129194 M444_RS25630 WP_008742948.1 5860575..5861369(-) (dinR/lexA) [Streptomyces sp. Mg1]
MTTTADSAATITAQNRSQSRLEPVHAMNDASLNPEAEPVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=129194 M444_RS25630 WP_008742948.1 5860575..5861369(-) (dinR/lexA) [Streptomyces sp. Mg1]
GTGACCACCACCGCAGACAGTGCCGCCACCATCACTGCCCAGAACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCAT
GAACGACGCAAGCCTGAACCCGGAGGCGGAGCCCGTACGCCCCGCCCGCTCGCTGCCAGGTCGCCCTCCAGGCATCCGCG
CCGACAGCTCGGGGCTCACGGATCGGCAGCGGAGGGTCATCGAGGTCATTCGGGACTCCGTGCAGCGGCGGGGTTACCCG
CCGTCGATGCGGGAGATCGGCCAGGCAGTCGGCCTGTCGAGCACGTCGTCGGTCGCACACCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCGCACCGCCCCCGGGCGTACGAGGTGCGCGGCTCCGACCAGCCGAGCTCGCAGCCCA
CGGACACCACTGGCAAGCCCGCCGCCTCCTACGTTCCCCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCCGAG
GAGTCGGTGGAGGACGTGTTCCCGCTCCCCCGCCAGCTCGTCGGTGACGGTGAGCTCTTCGTCCTCAAGGTCGTCGGCGA
CTCGATGATCGAGGCGGCCATCTGTGACGGCGACTGGGTCACGGTCCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCG
TCGCCGCGATGCTGGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTCCTCCCGCACAAC
GCCGCGTACCAGCCGATCCCCGGTGACGAGGCGACCATCCTCGGCAAGGTCGTCGCGGTACTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.303

0.375

Multiple sequence alignment