Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | M444_RS19770 | Genome accession | NZ_CP011664 |
| Coordinates | 4571251..4573776 (+) | Length | 841 a.a. |
| NCBI ID | WP_008743301.1 | Uniprot ID | A0ABZ1RL48 |
| Organism | Streptomyces sp. Mg1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4566251..4578776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M444_RS19730 (M444_19710) | - | 4566560..4567309 (+) | 750 | WP_008743293.1 | GntR family transcriptional regulator | - |
| M444_RS19735 (M444_19715) | - | 4567434..4567619 (+) | 186 | WP_008743294.1 | DUF397 domain-containing protein | - |
| M444_RS19740 (M444_19720) | - | 4567746..4568357 (+) | 612 | WP_008743295.1 | hypothetical protein | - |
| M444_RS42490 (M444_19725) | - | 4568372..4568539 (+) | 168 | WP_037794898.1 | hypothetical protein | - |
| M444_RS19750 (M444_19730) | - | 4568674..4569105 (+) | 432 | WP_037794899.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| M444_RS19755 (M444_19735) | - | 4569115..4569645 (+) | 531 | WP_008743298.1 | amino-acid N-acetyltransferase | - |
| M444_RS19760 (M444_19740) | - | 4569811..4570146 (+) | 336 | WP_008743299.1 | Lsr2 family protein | - |
| M444_RS19765 (M444_19745) | - | 4570128..4570799 (-) | 672 | WP_008743300.1 | SCO3374 family protein | - |
| M444_RS19770 (M444_19750) | clpC | 4571251..4573776 (+) | 2526 | WP_008743301.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| M444_RS19775 (M444_19755) | - | 4574205..4574783 (+) | 579 | WP_037794901.1 | M23 family metallopeptidase | - |
| M444_RS19780 (M444_19760) | - | 4574792..4575979 (-) | 1188 | WP_008743303.1 | LamG domain-containing protein | - |
| M444_RS19785 (M444_19765) | cseC | 4576090..4577403 (-) | 1314 | WP_037794903.1 | two-component system sensor histidine kinase CseC | - |
| M444_RS19790 (M444_19770) | cseB | 4577400..4578107 (-) | 708 | WP_008743305.1 | two-component system response regulator CseB | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 92930.12 Da Isoelectric Point: 5.9156
>NTDB_id=129172 M444_RS19770 WP_008743301.1 4571251..4573776(+) (clpC) [Streptomyces sp. Mg1]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYSGGGKESATAGGPAE
GTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETL
KDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA
TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDL
IDEAGSRMRIRRMTAPPDLREFDEKIANVRRDKESAIDSQDFEKAASLRDSEKQLLAAKAKREKEWKAGDMDVVAEVDGE
LIAEVLATATGIPVFKLTEEESSRLLRMEDELHRRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTEL
SKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL
EDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKTGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQ
LTQEDIIQIVDLMIAKVDERLKDRDMGIELSGEAKQLLAKRGYDPIMGARPLRRTIQREIEDMLSEKILFGELRPGHIVV
VGVEGEGEAAKFTFRGEEKSALPDLPPIEATGSGPDLSKGA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYSGGGKESATAGGPAE
GTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETL
KDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA
TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDL
IDEAGSRMRIRRMTAPPDLREFDEKIANVRRDKESAIDSQDFEKAASLRDSEKQLLAAKAKREKEWKAGDMDVVAEVDGE
LIAEVLATATGIPVFKLTEEESSRLLRMEDELHRRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTEL
SKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL
EDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKTGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQ
LTQEDIIQIVDLMIAKVDERLKDRDMGIELSGEAKQLLAKRGYDPIMGARPLRRTIQREIEDMLSEKILFGELRPGHIVV
VGVEGEGEAAKFTFRGEEKSALPDLPPIEATGSGPDLSKGA
Nucleotide
Download Length: 2526 bp
>NTDB_id=129172 M444_RS19770 WP_008743301.1 4571251..4573776(+) (clpC) [Streptomyces sp. Mg1]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCTTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCTGTTCGCCAGCAGGTTGAGGAGATCATCGGTCAGGGGCAGCAGGCCCCGTCCGGCCACATCCCCTTC
ACCCCGCGGGCGAAGAAGGTCCTGGAGCTTTCGCTCCGAGAGGCCCTCCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTCAACCGAG
TCAGGCAGCAGGTCATCCAGCTGCTCTCCGGGTACTCCGGAGGCGGCAAGGAGTCGGCCACCGCCGGCGGCCCGGCCGAG
GGAACCCCCTCGACCTCGCTCGTCCTGGACCAGTTCGGCCGCAACCTCACGCAGGCCGCTCGCGAATCCAAGCTCGACCC
GGTCATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTCTCCCGCCGGACCAAGAACAACCCGGTCCTCATCG
GCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCCCAGGCGATCGTCAAGGGCGAGGTCCCCGAGACCCTC
AAGGACAAGCACCTCTACACGCTTGACCTCGGTGCCCTGGTCGCCGGTTCCCGATACCGCGGTGACTTCGAAGAGCGCCT
CAAGAAGGTGCTGAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTCGTGGGTGCGG
GCGCCGCCGAGGGCGCGATCGACGCCGCGAGCATTCTGAAGCCCATGCTGGCCCGTGGTGAGCTCCAGACCATCGGTGCC
ACGACGCTCGACGAGTACCGCAAGCACCTTGAGAAGGACGCGGCCCTTGAGCGCCGCTTCCAGCCGATCCAGGTGGCGGA
GCCTTCCCTCCCCCACACGATCGAGATCCTCAAGGGCCTGCGCGACCGCTACGAGGCCCACCACCGCGTCTCCATCACGG
ACGAGGCCCTCGTGCAGGCGGCCACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTCCCGGACAAGGCGATCGACCTG
ATCGACGAGGCCGGCTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGC
GAACGTGCGTCGCGACAAGGAGTCGGCCATCGACTCCCAGGACTTCGAGAAGGCGGCTTCCCTCCGTGATTCGGAGAAGC
AGCTGCTGGCGGCGAAGGCCAAGCGCGAGAAGGAATGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAG
CTCATCGCCGAGGTCCTCGCGACCGCGACCGGCATTCCCGTCTTCAAGCTCACGGAGGAGGAGTCCTCCCGCCTCCTGCG
CATGGAGGACGAGCTCCACCGTCGCGTCATCGGCCAGAAGGACGCCATCAAGGCGCTCTCCCAGGCCATCCGCCGTACCC
GTGCGGGTCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTC
TCCAAGACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCA
CACGGTTTCCCGCCTCTTCGGCTCGCCCCCCGGTTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCC
GGAAGCCGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCGCACCCGGATATCTTCAATTCCCTTCTCCAGATCCTG
GAGGACGGCCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTGGG
TACGCGGGACATCTCGAAGGGCTTCAACCTGGGCTTCGCGGCCCAGGGCGACACCAAGACCGGATACGACCGGATGAAGG
CGAAGGTCAACGAAGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAG
CTCACGCAGGAAGACATCATCCAGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGCCTCAAGGACCGTGACATGGG
CATCGAGCTCAGCGGTGAGGCGAAGCAGCTCCTGGCCAAGCGCGGCTACGACCCGATCATGGGTGCGCGCCCGCTGCGCC
GGACCATCCAGCGCGAGATCGAGGACATGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTC
GTCGGTGTGGAGGGTGAGGGCGAGGCCGCCAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCTCTGCCGGACCTCCCCCC
GATCGAGGCGACGGGCTCCGGCCCGGACCTCTCCAAGGGCGCCTGA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCTTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCTGTTCGCCAGCAGGTTGAGGAGATCATCGGTCAGGGGCAGCAGGCCCCGTCCGGCCACATCCCCTTC
ACCCCGCGGGCGAAGAAGGTCCTGGAGCTTTCGCTCCGAGAGGCCCTCCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTCAACCGAG
TCAGGCAGCAGGTCATCCAGCTGCTCTCCGGGTACTCCGGAGGCGGCAAGGAGTCGGCCACCGCCGGCGGCCCGGCCGAG
GGAACCCCCTCGACCTCGCTCGTCCTGGACCAGTTCGGCCGCAACCTCACGCAGGCCGCTCGCGAATCCAAGCTCGACCC
GGTCATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTCTCCCGCCGGACCAAGAACAACCCGGTCCTCATCG
GCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCCCAGGCGATCGTCAAGGGCGAGGTCCCCGAGACCCTC
AAGGACAAGCACCTCTACACGCTTGACCTCGGTGCCCTGGTCGCCGGTTCCCGATACCGCGGTGACTTCGAAGAGCGCCT
CAAGAAGGTGCTGAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTCGTGGGTGCGG
GCGCCGCCGAGGGCGCGATCGACGCCGCGAGCATTCTGAAGCCCATGCTGGCCCGTGGTGAGCTCCAGACCATCGGTGCC
ACGACGCTCGACGAGTACCGCAAGCACCTTGAGAAGGACGCGGCCCTTGAGCGCCGCTTCCAGCCGATCCAGGTGGCGGA
GCCTTCCCTCCCCCACACGATCGAGATCCTCAAGGGCCTGCGCGACCGCTACGAGGCCCACCACCGCGTCTCCATCACGG
ACGAGGCCCTCGTGCAGGCGGCCACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTCCCGGACAAGGCGATCGACCTG
ATCGACGAGGCCGGCTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGC
GAACGTGCGTCGCGACAAGGAGTCGGCCATCGACTCCCAGGACTTCGAGAAGGCGGCTTCCCTCCGTGATTCGGAGAAGC
AGCTGCTGGCGGCGAAGGCCAAGCGCGAGAAGGAATGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAG
CTCATCGCCGAGGTCCTCGCGACCGCGACCGGCATTCCCGTCTTCAAGCTCACGGAGGAGGAGTCCTCCCGCCTCCTGCG
CATGGAGGACGAGCTCCACCGTCGCGTCATCGGCCAGAAGGACGCCATCAAGGCGCTCTCCCAGGCCATCCGCCGTACCC
GTGCGGGTCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTC
TCCAAGACGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCA
CACGGTTTCCCGCCTCTTCGGCTCGCCCCCCGGTTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCC
GGAAGCCGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCGCACCCGGATATCTTCAATTCCCTTCTCCAGATCCTG
GAGGACGGCCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTGGG
TACGCGGGACATCTCGAAGGGCTTCAACCTGGGCTTCGCGGCCCAGGGCGACACCAAGACCGGATACGACCGGATGAAGG
CGAAGGTCAACGAAGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACACGGTCGTCTTCCACCAG
CTCACGCAGGAAGACATCATCCAGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGCCTCAAGGACCGTGACATGGG
CATCGAGCTCAGCGGTGAGGCGAAGCAGCTCCTGGCCAAGCGCGGCTACGACCCGATCATGGGTGCGCGCCCGCTGCGCC
GGACCATCCAGCGCGAGATCGAGGACATGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTC
GTCGGTGTGGAGGGTGAGGGCGAGGCCGCCAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCTCTGCCGGACCTCCCCCC
GATCGAGGCGACGGGCTCCGGCCCGGACCTCTCCAAGGGCGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.567 |
95.6 |
0.589 |
| clpC | Streptococcus mutans UA159 |
44.578 |
98.692 |
0.44 |
| clpC | Streptococcus thermophilus LMD-9 |
43.452 |
99.881 |
0.434 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.282 |
100 |
0.433 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.966 |
96.552 |
0.424 |
| clpC | Streptococcus pneumoniae Rx1 |
43.781 |
95.6 |
0.419 |
| clpC | Streptococcus pneumoniae D39 |
43.781 |
95.6 |
0.419 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.532 |
95.6 |
0.416 |
| clpE | Streptococcus mutans UA159 |
53.514 |
74.435 |
0.398 |
| clpE | Streptococcus pneumoniae D39 |
51.73 |
75.624 |
0.391 |
| clpE | Streptococcus pneumoniae R6 |
51.73 |
75.624 |
0.391 |
| clpE | Streptococcus pneumoniae Rx1 |
51.73 |
75.624 |
0.391 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.488 |
74.078 |
0.389 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.419 |
73.722 |
0.386 |