Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LA50_RS09895 Genome accession   NZ_CP009418
Coordinates   1873686..1874147 (-) Length   153 a.a.
NCBI ID   WP_002212941.1    Uniprot ID   A1KUS7
Organism   Neisseria meningitidis strain NM3686     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1868686..1879147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LA50_RS09870 (LA50_10405) surE 1870206..1870952 (+) 747 WP_002220609.1 5'/3'-nucleotidase SurE -
  LA50_RS09875 (LA50_10410) - 1871208..1872455 (+) 1248 WP_002248084.1 M23 family metallopeptidase -
  LA50_RS09880 (LA50_10415) - 1872816..1873298 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  LA50_RS09890 (LA50_10425) - 1873451..1873612 (-) 162 WP_002221773.1 hypothetical protein -
  LA50_RS09895 (LA50_10430) recX 1873686..1874147 (-) 462 WP_002212941.1 recombination regulator RecX Regulator
  LA50_RS09900 (LA50_10435) - 1874220..1874930 (-) 711 WP_002221774.1 phosphoglycolate phosphatase -
  LA50_RS09910 (LA50_10445) - 1875337..1876602 (+) 1266 WP_002221776.1 Glu/Leu/Phe/Val family dehydrogenase -
  LA50_RS09915 (LA50_10450) - 1876660..1877466 (-) 807 WP_002212946.1 DUF4198 domain-containing protein -
  LA50_RS09920 (LA50_10455) - 1877811..1878020 (+) 210 WP_002212949.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17761.04 Da        Isoelectric Point: 9.9314

>NTDB_id=129015 LA50_RS09895 WP_002212941.1 1873686..1874147(-) (recX) [Neisseria meningitidis strain NM3686]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=129015 LA50_RS09895 WP_002212941.1 1873686..1874147(-) (recX) [Neisseria meningitidis strain NM3686]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1KUS7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

97.386

100

0.974

Multiple sequence alignment