Detailed information NTG0128992

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ABA10_RS13440
• Genome accession: NZ_CP011534
• Coordinates: 2609682..2610947 (+)
• Length: 421 a.a.
• NCBI ID: WP_047182958.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain UD1022
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2604682..2615947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABA10_RS13420 (ABA10_13420)	yrrB	2606053..2606673 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
ABA10_RS13425 (ABA10_13425)	mnmA	2606759..2607874 (-)	1116	WP_015483502.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABA10_RS13430 (ABA10_13430)	iscSA	2607902..2609044 (-)	1143	WP_015384237.1	cysteine desulfurase family protein	-
ABA10_RS13435 (ABA10_13435)	cymR	2609063..2609479 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ABA10_RS13440 (ABA10_13440)	rarA	2609682..2610947 (+)	1266	WP_047182958.1	replication-associated recombination protein A	Machinery gene
ABA10_RS13445 (ABA10_13445)	tcdA	2610987..2611751 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
ABA10_RS13455 (ABA10_13455)	aspS	2612086..2613864 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
ABA10_RS13460 (ABA10_13460)	hisS	2613878..2615152 (-)	1275	WP_047182959.1	histidine--tRNA ligase	-
ABA10_RS21270 (ABA10_13465)	yrzK	2615533..2615703 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.25 Da
• Isoelectric Point: 7.0104

>NTDB_id=128992 ABA10_RS13440 WP_047182958.1 2609682..2610947(+) (rarA) [Bacillus subtilis strain UD1022]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDNLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=128992 ABA10_RS13440 WP_047182958.1 2609682..2610947(+) (rarA) [Bacillus subtilis strain UD1022]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATTGTAGCCCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTGGAAAACGGGATGATCATTTTGATCGGAGCAACCACAGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAGCCGTTAACACCCGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTCGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAAGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATACGCGGCTCTGATGCCAACGCTGCTCTCCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAATTTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993