Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ABA10_RS09725 Genome accession   NZ_CP011534
Coordinates   1916391..1917008 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain UD1022     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1911391..1922008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABA10_RS09695 (ABA10_09695) yndJ 1911713..1913353 (+) 1641 WP_015383759.1 YndJ family protein -
  ABA10_RS09700 (ABA10_09700) - 1913440..1913754 (+) 315 WP_174616646.1 hypothetical protein -
  ABA10_RS09705 (ABA10_09705) pghL 1913979..1914737 (+) 759 WP_047182675.1 gamma-polyglutamate hydrolase PghL -
  ABA10_RS09710 (ABA10_09710) - 1914764..1915213 (-) 450 WP_015483284.1 YndM family protein -
  ABA10_RS09715 (ABA10_09715) fosB 1915419..1915853 (+) 435 WP_015383763.1 metallothiol transferase FosB -
  ABA10_RS22010 - 1915762..1916038 (+) 277 Protein_1851 hypothetical protein -
  ABA10_RS09725 (ABA10_09725) dinR/lexA 1916391..1917008 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ABA10_RS09730 (ABA10_09730) yneA 1917158..1917475 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ABA10_RS09735 (ABA10_09735) dinL 1917494..1918147 (+) 654 WP_015383764.1 recombinase family protein -
  ABA10_RS09740 (ABA10_09740) ynzC 1918211..1918444 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ABA10_RS09745 (ABA10_09745) recP/tkt 1918613..1920616 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ABA10_RS09750 (ABA10_09750) sirA 1920769..1921215 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ABA10_RS09755 (ABA10_09755) yneF 1921301..1921519 (+) 219 WP_003221221.1 YneF family protein -
  ABA10_RS09760 (ABA10_09760) ynzD 1921593..1921766 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=128964 ABA10_RS09725 WP_003238209.1 1916391..1917008(-) (dinR/lexA) [Bacillus subtilis strain UD1022]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=128964 ABA10_RS09725 WP_003238209.1 1916391..1917008(-) (dinR/lexA) [Bacillus subtilis strain UD1022]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTTAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCCGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment