Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   O165_RS20260 Genome accession   NZ_CP009365
Coordinates   4405379..4405780 (-) Length   133 a.a.
NCBI ID   WP_023631716.1    Uniprot ID   A0A1H9SY95
Organism   Pseudomonas soli strain SJ10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4400379..4410780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O165_RS20245 (O165_020690) - 4402327..4404351 (-) 2025 WP_123902601.1 methyl-accepting chemotaxis protein -
  O165_RS20250 (O165_020695) - 4404415..4404969 (-) 555 WP_038706921.1 chemotaxis protein CheW -
  O165_RS20255 (O165_020700) pilH 4404966..4405331 (-) 366 WP_023631715.1 twitching motility response regulator PilH -
  O165_RS20260 (O165_020705) pilG 4405379..4405780 (-) 402 WP_023631716.1 twitching motility response regulator PilG Regulator
  O165_RS20265 (O165_020710) gshB 4405964..4406917 (+) 954 WP_038706922.1 glutathione synthase -
  O165_RS20270 (O165_020715) - 4407151..4408050 (+) 900 WP_023631717.1 energy transducer TonB -
  O165_RS20275 (O165_020720) - 4408144..4408713 (+) 570 WP_038706923.1 YqgE/AlgH family protein -
  O165_RS20280 (O165_020725) ruvX 4408713..4409138 (+) 426 WP_023633141.1 Holliday junction resolvase RuvX -
  O165_RS20285 (O165_020730) pyrR 4409191..4409709 (+) 519 WP_038706924.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  O165_RS20290 (O165_020735) - 4409722..4410726 (+) 1005 WP_038706925.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14752.11 Da        Isoelectric Point: 6.7058

>NTDB_id=128945 O165_RS20260 WP_023631716.1 4405379..4405780(-) (pilG) [Pseudomonas soli strain SJ10]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRVIFVDVLMPRLDGYQTCAIIKHNREFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRACVPGFAAQDPHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=128945 O165_RS20260 WP_023631716.1 4405379..4405780(-) (pilG) [Pseudomonas soli strain SJ10]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
AGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGACGCCCTGGCCAAGATCGTCGACCACAAACCGCGGGTCATCTTCG
TCGACGTGCTGATGCCGCGCCTCGACGGCTACCAGACCTGCGCCATCATCAAGCACAACCGCGAGTTCAAGGACACCCCG
GTGATCCTGCTCTCTTCCCGCGACGGCTTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGACCAGTTCCTGACAAA
ACCTTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCTGCGTGCCGGGCTTCGCCGCGCAGGATCCACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H9SY95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.213

91.729

0.617

Multiple sequence alignment