Detailed information NTG0128900

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ABA10_RS01630
• Genome accession: NZ_CP011534
• Coordinates: 293699..294820 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain UD1022
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 288699..299820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABA10_RS01610 (ABA10_01610)	ycdA	288704..289768 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
ABA10_RS21555	-	289791..289922 (-)	132	WP_003246334.1	hypothetical protein	-
ABA10_RS01615 (ABA10_01615)	ycdB	290096..291517 (+)	1422	WP_047182035.1	YcdB/YcdC domain-containing protein	-
ABA10_RS01620 (ABA10_01620)	ycdC	291704..293065 (+)	1362	WP_047183527.1	YcdB/YcdC domain-containing protein	-
ABA10_RS01625 (ABA10_01625)	cwlK	293073..293576 (-)	504	WP_047182036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ABA10_RS01630 (ABA10_01630)	rapF	293699..294820 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
ABA10_RS01635 (ABA10_01635)	ycdF	294928..295704 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
ABA10_RS01640 (ABA10_01640)	ycdG	295729..297414 (+)	1686	WP_047182037.1	alpha-glucosidase	-
ABA10_RS01645 (ABA10_01645)	znuA	297602..298561 (+)	960	WP_047182038.1	metal ABC transporter substrate-binding protein	-
ABA10_RS01650 (ABA10_01650)	znuC	298616..299311 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=128900 ABA10_RS01630 WP_015715201.1 293699..294820(+) (rapF) [Bacillus subtilis strain UD1022]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=128900 ABA10_RS01630 WP_015715201.1 293699..294820(+) (rapF) [Bacillus subtilis strain UD1022]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGCCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405