Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ABA10_RS00215 Genome accession   NZ_CP011534
Coordinates   41509..42336 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain UD1022     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36509..47336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABA10_RS00190 (ABA10_00190) efpO 37572..39014 (+) 1443 WP_047181964.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ABA10_RS00195 (ABA10_00195) tmk 39011..39649 (+) 639 WP_047181965.1 dTMP kinase -
  ABA10_RS00200 (ABA10_00200) darA 39723..40052 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ABA10_RS00205 (ABA10_00205) yaaR 40065..40505 (+) 441 WP_015382556.1 YaaR family protein -
  ABA10_RS00210 (ABA10_00210) holB 40517..41506 (+) 990 WP_015482689.1 DNA polymerase III subunit delta' -
  ABA10_RS00215 (ABA10_00215) yaaT 41509..42336 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ABA10_RS00220 (ABA10_00220) yabA 42351..42710 (+) 360 WP_047181966.1 replication initiation-control protein YabA -
  ABA10_RS00225 (ABA10_00225) trmNF 42769..43512 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ABA10_RS00230 (ABA10_00230) yazA 43499..43798 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ABA10_RS00235 (ABA10_00235) rsmI 43773..44651 (+) 879 WP_041517603.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ABA10_RS00240 (ABA10_00240) abrB 44700..44990 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=128892 ABA10_RS00215 WP_003226767.1 41509..42336(+) (yaaT) [Bacillus subtilis strain UD1022]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=128892 ABA10_RS00215 WP_003226767.1 41509..42336(+) (yaaT) [Bacillus subtilis strain UD1022]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTCAGAGAGCTTGTAAAGGATTTGG
CATCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATAGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996