Detailed information NTG0128852

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: IX91_RS02430
• Genome accession: NZ_CP009354
• Coordinates: 498538..501924 (-)
• Length: 1128 a.a.
• NCBI ID: WP_004742648.1
• Uniprot ID: F9SZC3
• Organism: Vibrio tubiashii ATCC 19109
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 493538..506924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX91_RS02415 (IX91_02475)	-	494015..495040 (-)	1026	WP_004742645.1	ABC transporter permease	-
IX91_RS02420 (IX91_02480)	-	495043..496029 (-)	987	WP_004742646.1	ABC transporter permease	-
IX91_RS02425 (IX91_02485)	-	496203..497885 (-)	1683	WP_004742647.1	ABC transporter substrate-binding protein	-
IX91_RS02430 (IX91_02490)	chiS	498538..501924 (-)	3387	WP_004742648.1	response regulator	Regulator
IX91_RS02435 (IX91_02495)	rsmC	502134..503156 (-)	1023	WP_004742649.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
IX91_RS02440 (IX91_02500)	-	503251..504336 (-)	1086	WP_004742650.1	AI-2E family transporter	-
IX91_RS02445 (IX91_02505)	hemL	504601..505893 (-)	1293	WP_004742652.1	glutamate-1-semialdehyde 2,1-aminomutase	-
IX91_RS02450 (IX91_02510)	erpA	506145..506486 (+)	342	WP_004742653.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127111.37 Da
• Isoelectric Point: 5.7166

>NTDB_id=128852 IX91_RS02430 WP_004742648.1 498538..501924(-) (chiS) [Vibrio tubiashii ATCC 19109]
MFKFYRKQKFKRLQSTLMLAFLVLSITPLTVIAIFFLQSHTQDLQEQSTSHLTSVRDSKRQQVIDYLYAKESEVMGFVRS
ELAYASGGRFYGLVNAFSSLGLDIEQAREYAQRRYIQGSGDQIKTSILPQSSVYNGTERYRLLHKRYHWAYLELLKRSDF
DDILLVDREGNVTYSIYKHDNFGTNLLTGKYKDDNLGKTFAKLRNLVNDKRKTNEDFTPLIISDFSSEQGKPVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADKSNLVSMKTLLVGSDHQSRTLAYQQEDIDKSRQVVDLALTGASDVGTYTNTENEA
IIAAYSPISFKGIDWAIVVEVPESVAFARVHQLETLFIFAMLTAILLVVMASHYLSNFITSPLLQLTWAAEKVSAGDLDA
DMNNTQRKDEIGRLAISFERMQRSIREKILLIKQQNEELESNLQLIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALASGANGPITSEHKYQLDIIINSGQRLATLVDDLLDYHKMRYGNLDIETSAVDLAGSTRLVLELSSHLIGSKPLRI
INQVPDEPVWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISASVVDDNIRVQVVDTGQGIPADQLDHIFEPLIQAGSDAS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPIANTEQIEHANHYESAHFRAPNSGEIELEEPASLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKDGHEALEAISKEKPELLLLDIMMPGMSGYQVCETLRETYDHAQLPVIM
LTALNQTDDRVRGFNAGANDYLSKPFNKQELAARIVAHLTASKAEQRRIENQQLHQELKHRAIVEASLLETQGRLLEQLE
TAPEAIVCVREDNKIRFANEAASRLFKRSTEQLKRSSADEIIAPKFLNVEQEHYCGTIDVYVEDVRQHLSADILKLPEGA
GLRSMYIFNVGGGINAARINNLETAIEALSSFAFEGDKAKLQELKELGGEFTRLADRATSDNKSKQEVMREVLVEAMTSA
LIYWESVTGQTKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRPETLPKTPRWRTVLSSLDYILEHCNEQSPERTHIEGLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=128852 IX91_RS02430 WP_004742648.1 498538..501924(-) (chiS) [Vibrio tubiashii ATCC 19109]
ATGTTTAAGTTTTATCGAAAACAGAAGTTTAAACGCCTTCAGAGTACCTTAATGCTGGCATTTTTAGTGTTGAGTATTAC
CCCTCTGACGGTTATTGCGATCTTTTTCTTACAATCCCACACTCAAGATCTTCAAGAGCAAAGTACCTCACACCTAACCT
CGGTTAGAGATAGCAAGCGCCAACAAGTGATCGATTACTTATACGCCAAGGAATCTGAGGTAATGGGCTTCGTCCGTTCG
GAATTAGCCTATGCCAGTGGCGGACGTTTCTATGGTTTGGTCAACGCATTTAGCAGCTTAGGTTTGGATATTGAGCAAGC
TCGTGAGTACGCTCAGCGTCGTTATATCCAAGGTTCAGGCGACCAAATTAAAACCTCAATATTACCTCAGTCCAGTGTCT
ACAACGGTACAGAGCGCTACCGCCTTCTCCACAAACGTTATCACTGGGCATATCTAGAGCTTCTAAAGCGCTCTGATTTT
GATGACATTCTACTTGTCGATAGAGAAGGTAATGTCACTTACTCGATCTACAAGCATGATAACTTTGGTACTAACCTACT
GACGGGTAAATACAAAGACGATAACTTAGGTAAAACCTTCGCTAAGCTGCGTAATCTAGTTAACGATAAACGCAAAACCA
ATGAAGATTTTACCCCTCTGATTATTTCCGACTTTTCTAGCGAGCAGGGAAAACCCGTAGCTTGGCTTGGTGCGCCTATA
ATCCAGCAAGGCTATTTGCACAGTTATGCGATGTTCAGGTTGCCAAATAATGGCATCACCAAACTGGTCGCCGACAAGAG
CAATCTGGTGTCGATGAAGACGTTACTAGTCGGCTCCGATCATCAATCACGCACCCTTGCCTACCAACAAGAAGATATTG
ATAAAAGCCGTCAAGTGGTCGACCTTGCACTTACAGGTGCAAGCGACGTAGGCACTTATACTAATACCGAAAATGAAGCG
ATTATTGCCGCATACAGCCCAATTTCCTTTAAAGGCATTGACTGGGCCATTGTGGTAGAAGTGCCAGAAAGCGTCGCCTT
CGCCCGTGTCCACCAGCTCGAAACCCTGTTTATCTTCGCCATGCTGACAGCCATTCTCTTGGTTGTCATGGCCTCGCATT
ATTTGTCGAACTTTATCACCTCACCACTGCTGCAACTGACTTGGGCAGCAGAGAAAGTGTCAGCTGGCGATCTTGATGCC
GACATGAACAACACTCAGCGCAAAGACGAAATCGGGCGCTTGGCGATCAGCTTCGAGCGGATGCAGCGTTCTATTAGAGA
AAAGATCCTTCTGATCAAACAGCAGAATGAAGAGCTAGAAAGTAATCTTCAACTGATCCAGAAGCAAAATGAAGAACTGC
AATTGGCGAATAAACTCAAAGATGAGTTCTTAGCCACGACTTCCCATGAGCTACGCACACCACTTCATGGTATGGTCGGT
ATAGCTGAAGCCCTCGCCTCTGGCGCTAATGGCCCAATCACCTCTGAACATAAGTATCAGCTCGATATCATCATCAATAG
TGGTCAACGTTTAGCAACCTTGGTTGATGACCTGCTCGACTATCATAAGATGCGCTATGGCAATCTAGATATAGAGACCA
GTGCCGTCGATTTAGCAGGCTCTACTCGCTTGGTATTGGAACTCTCTTCTCATCTTATTGGCTCTAAGCCTCTGCGAATT
ATTAATCAGGTTCCAGACGAGCCTGTCTGGGTTAGCGCTGATCCGCAACGACTAGAGCAAGTTTTATATAACTTGGTCGG
CAATGCGATTAAGTACACAAGTGAAGGGAAGATCGTTATCTCTGCCAGTGTGGTAGATGACAACATTCGCGTTCAAGTGG
TCGATACAGGGCAAGGTATCCCAGCGGATCAACTTGACCATATATTTGAACCTCTTATTCAAGCAGGAAGCGACGCGAGT
CGTTATCGTCAGGGAGCGGGATTGGGCTTGTCGATTAGCCGTCAGCTAATTGAACTAATGCAAGGTACGCTCTATGTCAG
CAGTCAACCTATGGTTGGAACCACCTTTAGCTTCACGTTGCCAATCGCCAATACAGAGCAAATTGAGCATGCAAACCATT
ATGAATCCGCTCATTTTAGAGCGCCAAACTCTGGTGAGATTGAACTAGAGGAGCCAGCAAGCTTACCTGAAAATCCAGAC
GGCCCACTATTACTTGTCGTCGACGACGAACCCGTAAACTTACGGGTACTGGATAGTTTCTTGCGCCTAGAAGGCTATCG
TGTTCGAACCGCGAAAGATGGTCATGAGGCGCTTGAAGCCATCAGTAAAGAAAAACCTGAGCTGCTACTACTGGATATCA
TGATGCCAGGAATGAGTGGTTACCAAGTATGTGAAACTCTGCGCGAGACCTACGATCATGCGCAACTACCCGTGATCATG
CTAACCGCTTTAAACCAAACTGATGATCGGGTACGTGGCTTTAACGCGGGTGCCAACGACTATCTATCCAAGCCATTTAA
CAAGCAAGAGCTGGCTGCTCGTATCGTCGCTCATCTCACCGCTAGCAAAGCGGAACAGCGTCGAATCGAAAATCAGCAGC
TGCATCAAGAGCTAAAACATCGGGCAATCGTCGAAGCGAGTTTACTTGAGACACAAGGCCGACTACTTGAGCAACTTGAG
ACCGCTCCAGAGGCCATTGTCTGCGTACGAGAAGATAATAAGATTCGCTTCGCCAACGAGGCAGCATCAAGACTGTTTAA
ACGCTCAACCGAACAGCTAAAGCGTTCAAGCGCCGACGAAATCATTGCGCCTAAGTTCCTCAACGTGGAACAGGAACACT
ACTGCGGCACTATTGATGTCTATGTAGAAGATGTAAGGCAACATCTGTCGGCAGATATCCTTAAACTACCTGAAGGAGCT
GGGCTGCGCTCTATGTACATCTTCAATGTGGGTGGTGGTATCAATGCTGCGCGTATTAACAACCTAGAAACCGCAATTGA
AGCATTATCTAGCTTCGCTTTTGAAGGGGATAAAGCAAAACTGCAAGAGCTTAAAGAACTAGGTGGTGAATTTACACGCT
TGGCAGACCGAGCAACAAGCGACAACAAATCGAAACAAGAGGTGATGCGCGAAGTATTGGTAGAAGCGATGACCAGCGCG
CTTATTTATTGGGAATCGGTCACAGGCCAAACTAAATTTGCTTTTGCTGAGCAAAGCGGTTTGTGGCGCGTGTATCTCGA
CCGAAGTACACTGCAAACCCGTACCTTGGACAAGTACCTCCGACCGGAAACCCTACCTAAGACTCCGCGTTGGAGAACCG
TATTAAGCTCTCTCGATTACATTCTTGAGCACTGTAATGAACAAAGTCCAGAGAGAACCCACATAGAAGGATTACGCGAT
AAATTGCAGCATTTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

3D structure

• AlphaFold DB: F9SZC3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.433	100	0.794