Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BF38_RS15630 | Genome accession | NZ_CP009335 |
| Coordinates | 2413271..2413594 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus thuringiensis strain HD1011 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2408271..2418594
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF38_RS15605 (BF38_2498) | - | 2408446..2409732 (+) | 1287 | WP_000247011.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| BF38_RS15610 (BF38_2499) | sipW | 2409927..2410496 (+) | 570 | WP_000767813.1 | signal peptidase I SipW | - |
| BF38_RS15615 (BF38_2500) | - | 2410559..2411146 (+) | 588 | WP_000172840.1 | CalY family protein | - |
| BF38_RS15620 (BF38_2501) | - | 2411308..2412204 (+) | 897 | WP_000917470.1 | DUF4047 domain-containing protein | - |
| BF38_RS15625 (BF38_2502) | calY | 2412602..2413195 (+) | 594 | WP_000053731.1 | biofilm matrix protein CalY | - |
| BF38_RS15630 (BF38_2503) | sinR | 2413271..2413594 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| BF38_RS15635 | - | 2413674..2413808 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| BF38_RS15640 (BF38_2504) | inhA1 | 2414152..2416539 (+) | 2388 | WP_001035926.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| BF38_RS15645 (BF38_2505) | - | 2416711..2418078 (+) | 1368 | WP_000116798.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=128695 BF38_RS15630 WP_000578878.1 2413271..2413594(-) (sinR) [Bacillus thuringiensis strain HD1011]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=128695 BF38_RS15630 WP_000578878.1 2413271..2413594(-) (sinR) [Bacillus thuringiensis strain HD1011]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCTGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCTGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |