Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BF38_RS15125 Genome accession   NZ_CP009335
Coordinates   2320738..2320914 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain HD1011     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2315738..2325914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BF38_RS15105 (BF38_2402) clpB 2316075..2318675 (+) 2601 WP_000365381.1 ATP-dependent chaperone ClpB -
  BF38_RS15110 (BF38_2403) - 2318709..2318891 (-) 183 WP_001211116.1 YjzD family protein -
  BF38_RS15115 (BF38_2404) - 2319048..2319782 (+) 735 WP_000028701.1 hydrolase -
  BF38_RS15120 (BF38_2405) - 2319812..2320684 (+) 873 WP_017650999.1 NAD-dependent epimerase/dehydratase family protein -
  BF38_RS15125 (BF38_2406) comZ 2320738..2320914 (+) 177 WP_009879752.1 ComZ family protein Regulator
  BF38_RS15130 (BF38_2407) fabH 2321305..2322237 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  BF38_RS15135 (BF38_2408) fabF 2322269..2323507 (+) 1239 WP_000412649.1 beta-ketoacyl-ACP synthase II -
  BF38_RS15140 (BF38_2409) - 2323614..2324402 (+) 789 WP_000513289.1 DUF2268 domain-containing protein -
  BF38_RS15145 (BF38_2410) - 2324546..2325292 (+) 747 WP_000966135.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=128690 BF38_RS15125 WP_009879752.1 2320738..2320914(+) (comZ) [Bacillus thuringiensis strain HD1011]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=128690 BF38_RS15125 WP_009879752.1 2320738..2320914(+) (comZ) [Bacillus thuringiensis strain HD1011]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment