Detailed information NTG0128678

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BF38_RS09175
• Genome accession: NZ_CP009335
• Coordinates: 1175788..1176915 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus thuringiensis strain HD1011
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1170788..1181915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BF38_RS09145 (BF38_1210)	spoIIIJ	1170834..1171601 (-)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-
BF38_RS09150 (BF38_1211)	rnpA	1171641..1172000 (-)	360	WP_000726628.1	ribonuclease P protein component	-
BF38_RS09155 (BF38_1212)	rpmH	1172077..1172211 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
BF38_RS09160 (BF38_1213)	dnaA	1172777..1174117 (+)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
BF38_RS09165 (BF38_1214)	dnaN	1174296..1175435 (+)	1140	WP_001212527.1	DNA polymerase III subunit beta	-
BF38_RS09170 (BF38_1215)	yaaA	1175563..1175775 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
BF38_RS09175 (BF38_1216)	recF	1175788..1176915 (+)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
BF38_RS09180 (BF38_1217)	gyrB	1176954..1178877 (+)	1924	Protein_1191	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BF38_RS09185 (BF38_1219)	gyrA	1178966..1181437 (+)	2472	WP_001282849.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=128678 BF38_RS09175 WP_000470750.1 1175788..1176915(+) (recF) [Bacillus thuringiensis strain HD1011]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=128678 BF38_RS09175 WP_000470750.1 1175788..1176915(+) (recF) [Bacillus thuringiensis strain HD1011]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCAAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651