Detailed information NTG0128598

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BF39_RS22885
• Genome accession: NZ_CP009328
• Coordinates: 4025581..4026708 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470753.1
• Uniprot ID: Q6I535
• Organism: Bacillus anthracis strain Vollum 1B
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4020581..4031708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BF39_RS22855 (BF39_4302)	spoIIIJ	4020628..4021395 (-)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-
BF39_RS22860 (BF39_4303)	rnpA	4021435..4021794 (-)	360	WP_000726628.1	ribonuclease P protein component	-
BF39_RS22865 (BF39_4304)	rpmH	4021871..4022005 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
BF39_RS22870 (BF39_4305)	dnaA	4022570..4023910 (+)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
BF39_RS22875 (BF39_4306)	dnaN	4024089..4025228 (+)	1140	WP_001212528.1	DNA polymerase III subunit beta	-
BF39_RS22880 (BF39_4307)	yaaA	4025356..4025568 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
BF39_RS22885 (BF39_4308)	recF	4025581..4026708 (+)	1128	WP_000470753.1	DNA replication/repair protein RecF	Machinery gene
BF39_RS22890 (BF39_4309)	gyrB	4026747..4028669 (+)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BF39_RS22895 (BF39_4310)	gyrA	4028758..4031229 (+)	2472	WP_001282851.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.71 Da
• Isoelectric Point: 6.9850

>NTDB_id=128598 BF39_RS22885 WP_000470753.1 4025581..4026708(+) (recF) [Bacillus anthracis strain Vollum 1B]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=128598 BF39_RS22885 WP_000470753.1 4025581..4026708(+) (recF) [Bacillus anthracis strain Vollum 1B]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCGAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: Q6I535

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651