Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   AS53_RS10615 Genome accession   NZ_CP009315
Coordinates   1846354..1846638 (-) Length   94 a.a.
NCBI ID   WP_000843035.1    Uniprot ID   A0A6L7HTM5
Organism   Bacillus anthracis str. Turkey32 strain 35     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 1841354..1851638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS53_RS10580 (AS53_2009) tmk 1841507..1842133 (+) 627 WP_000677237.1 dTMP kinase -
  AS53_RS10585 (AS53_2010) holB 1842169..1843152 (+) 984 WP_000169560.1 DNA polymerase III subunit delta' -
  AS53_RS10590 (AS53_2011) - 1843158..1843985 (+) 828 WP_000272429.1 stage 0 sporulation family protein -
  AS53_RS10595 (AS53_2012) yabA 1844000..1844350 (+) 351 WP_000412056.1 DNA replication initiation control protein YabA -
  AS53_RS10600 (AS53_2013) - 1844471..1845211 (+) 741 WP_001055363.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  AS53_RS10605 - 1845198..1845489 (+) 292 Protein_1939 GIY-YIG nuclease family protein -
  AS53_RS10610 (AS53_2014) rsmI 1845458..1846333 (+) 876 WP_000267808.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AS53_RS10615 (AS53_2015) abrB 1846354..1846638 (-) 285 WP_000843035.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  AS53_RS10620 (AS53_2016) metG 1847129..1849111 (+) 1983 WP_000134128.1 methionine--tRNA ligase -
  AS53_RS10625 (AS53_2018) - 1849277..1850043 (+) 767 Protein_1943 TatD family hydrolase -
  AS53_RS10630 (AS53_2019) rnmV 1850258..1850815 (+) 558 WP_000692830.1 ribonuclease M5 -

Sequence


Protein


Download         Length: 94 a.a.        Molecular weight: 10550.27 Da        Isoelectric Point: 4.7174

>NTDB_id=128437 AS53_RS10615 WP_000843035.1 1846354..1846638(-) (abrB) [Bacillus anthracis str. Turkey32 strain 35]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLFLAEGKIILSKEGAE
QILNELQDYIETAK

Nucleotide


Download         Length: 285 bp        

>NTDB_id=128437 AS53_RS10615 WP_000843035.1 1846354..1846638(-) (abrB) [Bacillus anthracis str. Turkey32 strain 35]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATTTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6L7HTM5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

85.106

100

0.851


Multiple sequence alignment