Detailed information NTG0128435

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AS53_RS10425
• Genome accession: NZ_CP009315
• Coordinates: 1809176..1810303 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470753.1
• Uniprot ID: Q6I535
• Organism: Bacillus anthracis str. Turkey32 strain 35
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1804176..1815303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AS53_RS10395 (AS53_1971)	spoIIIJ	1804223..1804990 (-)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-
AS53_RS10400 (AS53_1972)	rnpA	1805030..1805389 (-)	360	WP_000726628.1	ribonuclease P protein component	-
AS53_RS10405 (AS53_1973)	rpmH	1805466..1805600 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
AS53_RS10410 (AS53_1974)	dnaA	1806165..1807505 (+)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
AS53_RS10415 (AS53_1975)	dnaN	1807684..1808823 (+)	1140	WP_001212526.1	DNA polymerase III subunit beta	-
AS53_RS10420 (AS53_1976)	yaaA	1808951..1809163 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
AS53_RS10425 (AS53_1977)	recF	1809176..1810303 (+)	1128	WP_000470753.1	DNA replication/repair protein RecF	Machinery gene
AS53_RS10430 (AS53_1978)	gyrB	1810342..1812264 (+)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AS53_RS10435 (AS53_1979)	gyrA	1812353..1814824 (+)	2472	WP_001282851.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.71 Da
• Isoelectric Point: 6.9850

>NTDB_id=128435 AS53_RS10425 WP_000470753.1 1809176..1810303(+) (recF) [Bacillus anthracis str. Turkey32 strain 35]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=128435 AS53_RS10425 WP_000470753.1 1809176..1810303(+) (recF) [Bacillus anthracis str. Turkey32 strain 35]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCGAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: Q6I535

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651