NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	EE66_RS04990	Genome accession	NZ_CP011483
Coordinates	1016972..1019542 (-)	Length	856 a.a.
NCBI ID	WP_064431199.1	Uniprot ID	-
Organism	Helicobacter pylori strain DU15
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1011972..1024542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EE66_RS04965 (EE66_04960)	miaB	1012210..1013523 (-)	1314	WP_082231426.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	-
EE66_RS04970 (EE66_04965)	-	1013533..1013775 (-)	243	WP_000780041.1	nuclease	-
EE66_RS04975 (EE66_04970)	mqnF	1013836..1015065 (-)	1230	WP_064431197.1	aminofutalosine deaminase	-
EE66_RS04980 (EE66_04975)	-	1015050..1016186 (-)	1137	WP_064431198.1	amidohydrolase family protein	-
EE66_RS04985 (EE66_04980)	-	1016196..1016915 (-)	720	WP_029567439.1	cytochrome c biogenesis protein CcdA	-
EE66_RS04990 (EE66_04985)	clpC	1016972..1019542 (-)	2571	WP_064431199.1	AAA family ATPase	Regulator
EE66_RS04995 (EE66_04990)	-	1019614..1020372 (-)	759	WP_064431200.1	site-specific DNA-methyltransferase	-
EE66_RS05000 (EE66_04995)	-	1020369..1021058 (-)	690	WP_064431201.1	BsaWI family type II restriction enzyme	-
EE66_RS05005 (EE66_05000)	xseA	1021265..1022527 (-)	1263	WP_064431202.1	exodeoxyribonuclease VII large subunit	-
EE66_RS05010 (EE66_05005)	rseP	1022540..1023586 (-)	1047	WP_154806616.1	RIP metalloprotease RseP	-
EE66_RS05015 (EE66_05010)	-	1023586..1024245 (-)	660	WP_064431204.1	MotE family protein	-

Sequence

Protein

Download Length: 856 a.a. Molecular weight: 96558.32 Da Isoelectric Point: 6.1140

                                >NTDB_id=128308 EE66_RS04990 WP_064431199.1 1016972..1019542(-) (clpC) [Helicobacter pylori strain DU15]

MNLFEKMTDQLHETLDSALALALHHKNAEVTPLHMLFVMLNNSQGILIQALQKMSVDIQALRLSVQSELNKLAKVSQINK

QNIQLNQALIQSLENAQGLMAKIGDSFIATDVYLLANMSLFESVLKPYLDTKELQKTLEALRKGATIQSKNDDSNWESLE

KFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL

SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYF

EKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM

QMESEPAKLSSVKRSIQRLEMEKQALEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFREISRLKMETESLK

KEAERFKRNGDYQQAGEIEYSKIPENKKKEEELQHKWEAMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVL

NIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEK

HAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV

ASGTLLEENLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAVANIVGILFENIQKKALERGINITLDEEAKEL

IAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENDSVAFVVENNEIVPKIK

Nucleotide

Download Length: 2571 bp

                                >NTDB_id=128308 EE66_RS04990 WP_064431199.1 1016972..1019542(-) (clpC) [Helicobacter pylori strain DU15]

ATGAATTTATTTGAAAAAATGACCGACCAATTGCATGAGACTTTAGACAGCGCGCTCGCTCTAGCCTTACACCATAAAAA

CGCTGAAGTAACGCCCTTGCACATGCTTTTTGTCATGCTCAATAACTCCCAAGGCATTCTCATTCAAGCCTTACAAAAAA

TGTCTGTGGATATTCAAGCCTTAAGGCTTAGCGTTCAAAGCGAGTTGAATAAGTTGGCTAAAGTTTCACAAATCAACAAG

CAAAATATCCAATTAAACCAAGCTCTAATCCAAAGTTTAGAAAACGCTCAAGGCTTGATGGCTAAAATTGGCGATTCTTT

CATCGCTACAGATGTGTATCTTTTGGCGAACATGAGCCTTTTTGAAAGCGTTCTAAAACCTTATTTAGACACTAAAGAAT

TGCAAAAAACTTTAGAGGCTTTGAGGAAGGGCGCGACTATCCAAAGTAAAAACGATGATTCTAATTGGGAAAGTTTGGAA

AAATTTGGTATTGATTTGACGCAAAAAGCCTTAGAAAATAAGCTCGATCCGGTGATTGGGAGGGATGAAGAAATCATTCG

CATGATGCAAATTTTGATAAGAAAAACAAAAAATAACCCTATTTTACTGGGTGAGCCTGGAGTGGGGAAAACGGCGGTTG

TGGAGGGTTTGGCCCAACGCATTGTGAATAAGGAAGTGCCTAAAACGCTTTTAAACAAACGAGTCGTCGCTTTAGATTTA

AGCTTGTTGGTGGCTGGAGCCAAATACAGAGGCGAGTTTGAAGAGCGTTTGAAAAAGGTGATTGAAGAAGTGAAAAAAAG

CGCGAATGTGATTTTATTCATTGATGAAATCCACACGATTGTGGGGGCTGGAGCGAGTGAGGGGGGCATGGATGCGGCTA

ATATTTTAAAACCCGCGCTCGCTAGGGGGGAATTGCACACGATTGGAGCGACCACTTTGAAAGAATACCGCAAGTATTTT

GAAAAAGACATGGCACTACAAAGGCGTTTCCAACCCATTTTGCTCAATGAGCCTAGCATCAATGAGGCTTTACAGATTTT

AAGGGGGTTAAAAGAAACTTTAGAAACGCACCATAATATCACCATCAATGACTCCGCACTCATAGCGAGCGCTAAACTCT

CTAGCCGTTATATCACCGATAGGTTTTTACCCGATAAAGCGATTGATTTGATTGATGAGGGGGCGGCCCAATTAAAAATG

CAAATGGAATCAGAGCCGGCAAAACTCTCTAGCGTTAAGCGCTCCATTCAAAGATTAGAAATGGAAAAACAAGCCCTTGA

AATGGAAAAAAAAGAGAGCAATGCCAAACGCATGCAAGAAATCCTTAAAGAATTGAGCGATTTGAAAGAAGAAAAAATCC

AATTAGAAGCGCAATTTGAGAACGAAAAGGAAGTGTTTAGGGAAATTTCACGCTTGAAAATGGAAACGGAAAGCTTGAAA

AAAGAGGCTGAGAGATTTAAGCGCAATGGGGATTACCAGCAAGCGGGTGAAATTGAATACTCTAAAATCCCTGAAAATAA

AAAGAAAGAAGAAGAATTGCAGCACAAATGGGAAGCGATGCAACAAAACGGGGCGTTGTTGCAAAACGCTTTAACCGAAA

ACAACATCGCTGAGATCGTGAGCCAATGGACGCATATCCCGGTCCAAAAAATGCTCCAAAGCGAAAAAAATAGGGTTTTA

AACATTGAAAGCGAATTGCAAAAAAGAGTGGTGGGGCAAGAAAAAGCACTCAAAGCGATCGCTAAAGCGATTAAAAGGAA

TAAGGCTGGACTTAGCGATAGCAACAAACCCATAGGGAGTTTCCTCTTTTTAGGGCCAACAGGCGTGGGTAAAACCGAGA

GCGCTAAAGCTTTGGCGCAATTCTTGTTTGATAGCGATAAAAATCTTATACGAATTGACATGAGCGAATACATGGAAAAA

CATGCCATAAGCCGTCTTATTGGGGCTGCTCCTGGGTATGTGGGCTATGAAGAAGGCGGGCAATTGACCGAAGCGGTGCG

CAGAAAACCCTATAGCGTGGTGCTGTTAGATGAAGTGGAAAAAGCCCATCCGGATGTGTTTAACCTTTTGTTGCAGGTTT

TAGATGAAGGGCATTTAACCGATAGTAAGGGCGTGAGGGTGGATTTCAAAAACACGATTTTGATTTTAACCAGCAATGTG

GCTAGCGGCACGCTTTTGGAAGAAAATTTGAGTGAAGCCGATAAACAAAAAGCGATTAAAGAGAGTTTGAGGCAATTCTT

CAAGCCGGAATTTTTAAACCGCTTAGATGAAATCATCTCCTTTAACGCCCTAGATAGCCATGCTGTCGCTAATATCGTGG

GGATTCTCTTTGAAAACATTCAAAAAAAAGCGCTTGAAAGGGGCATTAATATAACCCTAGACGAAGAGGCAAAAGAATTG

ATCGCTGAAGCGGGATTTGACAGATTTTATGGCGCTAGACCCTTAAAGCGCGCGCTCTATGAAATGGTAGAAGACAAGCT

CGCTGAACTCATCTTAGAGGATAAAATTAAAGAAAATGACAGCGTGGCGTTTGTGGTAGAAAATAACGAAATTGTGCCTA

AGATTAAGTGA