Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | PSTEL_RS18200 | Genome accession | NZ_CP009286 |
| Coordinates | 3921525..3921965 (+) | Length | 146 a.a. |
| NCBI ID | WP_038697497.1 | Uniprot ID | A0A089N813 |
| Organism | Paenibacillus stellifer strain DSM 14472 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3916525..3926965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSTEL_RS18175 (PSTEL_18920) | - | 3916605..3917432 (-) | 828 | WP_038697491.1 | sugar phosphate isomerase/epimerase | - |
| PSTEL_RS18180 (PSTEL_18925) | ltrA | 3917631..3919031 (-) | 1401 | WP_038694523.1 | group II intron reverse transcriptase/maturase | - |
| PSTEL_RS28175 | - | 3919524..3919895 (-) | 372 | WP_052098652.1 | WGxxGxxG family protein | - |
| PSTEL_RS28020 | - | 3920020..3920172 (+) | 153 | WP_169744603.1 | hypothetical protein | - |
| PSTEL_RS18190 (PSTEL_18940) | - | 3920190..3920525 (-) | 336 | WP_038697493.1 | YolD-like family protein | - |
| PSTEL_RS18195 (PSTEL_18945) | - | 3920863..3921387 (-) | 525 | WP_038697495.1 | hypothetical protein | - |
| PSTEL_RS18200 (PSTEL_18950) | nucA/comI | 3921525..3921965 (+) | 441 | WP_038697497.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| PSTEL_RS28180 | - | 3922249..3922341 (-) | 93 | WP_218917594.1 | YjcZ family sporulation protein | - |
| PSTEL_RS28185 | - | 3922543..3922662 (-) | 120 | WP_218917554.1 | YjcZ family sporulation protein | - |
| PSTEL_RS18205 | - | 3922783..3923313 (+) | 531 | WP_245624982.1 | thermonuclease family protein | - |
| PSTEL_RS18210 (PSTEL_18975) | - | 3923449..3924054 (-) | 606 | WP_084065160.1 | acetylglutamate kinase | - |
| PSTEL_RS18215 (PSTEL_18980) | - | 3924412..3924618 (+) | 207 | WP_038697499.1 | hypothetical protein | - |
| PSTEL_RS18220 (PSTEL_18985) | - | 3924757..3925377 (-) | 621 | WP_038697501.1 | polysaccharide deacetylase family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 16439.72 Da Isoelectric Point: 4.7610
>NTDB_id=128226 PSTEL_RS18200 WP_038697497.1 3921525..3921965(+) (nucA/comI) [Paenibacillus stellifer strain DSM 14472]
MRKRKLNRNLILLILLLIVLAYLAERNGWVVQEQEPPGTAVVKLVFPSDEYPETAEHIQKAIESGEPSVCTIDRDGAEEN
RKESLKGVPTKKRYDRDEWPMAMCKEGGAGADIEYIKPADNRGAGSWIGNQLDEYPDGTRVEFIIP
MRKRKLNRNLILLILLLIVLAYLAERNGWVVQEQEPPGTAVVKLVFPSDEYPETAEHIQKAIESGEPSVCTIDRDGAEEN
RKESLKGVPTKKRYDRDEWPMAMCKEGGAGADIEYIKPADNRGAGSWIGNQLDEYPDGTRVEFIIP
Nucleotide
Download Length: 441 bp
>NTDB_id=128226 PSTEL_RS18200 WP_038697497.1 3921525..3921965(+) (nucA/comI) [Paenibacillus stellifer strain DSM 14472]
GTGCGCAAACGAAAATTGAACCGAAATCTGATTCTCCTTATTTTGCTGCTGATCGTGCTGGCCTACCTCGCCGAACGGAA
CGGCTGGGTCGTTCAGGAGCAGGAGCCGCCGGGTACGGCGGTTGTGAAGCTGGTGTTCCCTTCGGACGAGTATCCGGAGA
CAGCAGAACATATCCAGAAGGCAATTGAAAGCGGAGAGCCGAGCGTCTGTACAATTGACCGGGATGGCGCCGAGGAGAAC
CGCAAGGAGTCGCTCAAAGGCGTTCCCACCAAGAAGCGTTATGACCGCGACGAATGGCCTATGGCCATGTGCAAGGAAGG
CGGCGCAGGCGCGGACATCGAATACATAAAGCCGGCCGACAACCGCGGCGCGGGCAGCTGGATCGGCAATCAGCTCGATG
AGTACCCGGATGGAACCCGGGTTGAATTCATCATCCCCTGA
GTGCGCAAACGAAAATTGAACCGAAATCTGATTCTCCTTATTTTGCTGCTGATCGTGCTGGCCTACCTCGCCGAACGGAA
CGGCTGGGTCGTTCAGGAGCAGGAGCCGCCGGGTACGGCGGTTGTGAAGCTGGTGTTCCCTTCGGACGAGTATCCGGAGA
CAGCAGAACATATCCAGAAGGCAATTGAAAGCGGAGAGCCGAGCGTCTGTACAATTGACCGGGATGGCGCCGAGGAGAAC
CGCAAGGAGTCGCTCAAAGGCGTTCCCACCAAGAAGCGTTATGACCGCGACGAATGGCCTATGGCCATGTGCAAGGAAGG
CGGCGCAGGCGCGGACATCGAATACATAAAGCCGGCCGACAACCGCGGCGCGGGCAGCTGGATCGGCAATCAGCTCGATG
AGTACCCGGATGGAACCCGGGTTGAATTCATCATCCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
71.569 |
69.863 |
0.5 |