Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R70331_RS15100 Genome accession   NZ_CP009284
Coordinates   3591383..3593143 (-) Length   586 a.a.
NCBI ID   WP_042176844.1    Uniprot ID   A0A089M7U3
Organism   Paenibacillus sp. FSL R7-0331     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3586383..3598143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R70331_RS15080 (R70331_15610) - 3586854..3587228 (+) 375 WP_042176835.1 hypothetical protein -
  R70331_RS15085 (R70331_15615) - 3587387..3588619 (+) 1233 WP_042176837.1 glycosyltransferase -
  R70331_RS15090 (R70331_15620) - 3588622..3589701 (+) 1080 WP_042176839.1 glycosyltransferase family 4 protein -
  R70331_RS15095 (R70331_15625) cls 3589882..3591324 (+) 1443 WP_042176841.1 cardiolipin synthase -
  R70331_RS15100 (R70331_15630) rcrQ 3591383..3593143 (-) 1761 WP_042176844.1 ABC transporter ATP-binding protein Regulator
  R70331_RS15105 (R70331_15635) rcrP 3593143..3594894 (-) 1752 WP_042176847.1 ABC transporter ATP-binding protein Regulator
  R70331_RS15110 (R70331_15640) - 3595071..3596138 (-) 1068 WP_197071336.1 HAMP domain-containing sensor histidine kinase -
  R70331_RS15115 (R70331_15645) - 3596135..3596809 (-) 675 WP_042176848.1 response regulator transcription factor -
  R70331_RS31550 - 3596953..3597123 (+) 171 WP_156131135.1 hypothetical protein -
  R70331_RS15120 (R70331_15655) - 3597210..3597857 (-) 648 WP_042176849.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64091.00 Da        Isoelectric Point: 5.7767

>NTDB_id=128160 R70331_RS15100 WP_042176844.1 3591383..3593143(-) (rcrQ) [Paenibacillus sp. FSL R7-0331]
MNKKSDQPSTWSRLLQYCRSYIPVILIAVISAAAGTILTLLGPDQLSELTDLITAGIAAGIDLDAIASIGFFLIFIYALS
AVLSLGQGLIMSMVTQKVSKSLRKDLSHKMNRLPISYYNKSTTGDILSRVTNDVDTIGQALNQSVGTLVTAVALFVGSMV
MMFKTNVLMTFTAIAATVIGFGLMAVIMKKSQKYFQSQQEFLGKINGHVEEVYTGHTVVKAYNGEAQMRGAFDSLNQSLK
QSAFKAQFLSGLMMPLMTFIGNLGYVAVCVVGAVLAINGSISFGVIVAFIMYVRFFTQPLAQMAQAAQNLQAASAASKRV
FEFLDAAEMDNEDHKDTRLTAADGHVVFEHVQFAYEDTDKLVIKDFSAEVQPGQKIAIVGPTGAGKTTLINLLIRFNELT
GGEIYIDGTPISSLTRENLHDLFCMVLQDTWMFEGTVRENLVYNKTGVTDAEMEEACRSVGLHHFIQTLSMGYDTVLNDK
VNLSAGQKQQLTIARAMLKNAPMLILDEATSSVDTRTELLIQQAMDQLMEGRTSFVIAHRLSTIKNADVILVLKDGDILE
SGNHHELLAKNGFYAELYNSQFEQAS

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=128160 R70331_RS15100 WP_042176844.1 3591383..3593143(-) (rcrQ) [Paenibacillus sp. FSL R7-0331]
ATGAACAAGAAATCAGACCAGCCAAGCACCTGGAGCCGGCTGCTCCAATATTGCCGGTCGTATATTCCCGTCATTCTTAT
CGCGGTTATCAGCGCTGCAGCGGGTACGATTCTTACACTGCTCGGGCCGGACCAGCTCTCTGAGCTGACGGATTTGATCA
CTGCAGGTATCGCGGCCGGCATCGATCTGGATGCTATAGCCTCAATCGGATTTTTCCTGATATTCATCTATGCACTCAGC
GCCGTTCTGTCCCTGGGACAAGGACTTATCATGTCAATGGTTACACAAAAGGTATCCAAGAGCCTGAGAAAAGACCTGTC
ACACAAAATGAACCGTCTGCCGATCTCCTACTATAATAAATCGACAACCGGTGATATTCTGTCCCGGGTTACAAATGACG
TGGATACGATCGGGCAGGCGCTGAACCAGAGTGTCGGCACGCTGGTTACTGCTGTCGCCCTGTTCGTCGGCTCGATGGTC
ATGATGTTCAAGACGAATGTGCTCATGACCTTCACCGCCATTGCTGCTACTGTAATCGGCTTTGGCCTGATGGCGGTAAT
CATGAAGAAATCACAGAAATACTTCCAGAGCCAGCAGGAATTCCTCGGGAAGATCAACGGGCATGTCGAGGAGGTCTATA
CCGGCCATACTGTAGTAAAAGCCTACAACGGTGAGGCGCAGATGCGCGGAGCCTTTGATTCACTGAACCAGTCACTGAAG
CAGAGCGCCTTCAAAGCGCAGTTCCTTTCCGGCCTGATGATGCCGCTGATGACCTTTATCGGGAATCTCGGATATGTGGC
TGTCTGTGTCGTCGGCGCTGTCCTGGCGATCAACGGCTCAATCTCCTTTGGTGTGATTGTCGCCTTCATTATGTATGTCC
GGTTCTTCACCCAGCCGCTGGCGCAAATGGCCCAGGCCGCACAGAATCTGCAGGCAGCTTCTGCTGCCAGCAAACGCGTA
TTTGAATTTCTGGATGCCGCAGAAATGGATAATGAAGATCACAAGGATACCAGGCTCACCGCTGCTGATGGCCATGTAGT
CTTTGAACATGTGCAGTTCGCCTATGAGGATACCGATAAGCTGGTAATCAAGGACTTCTCCGCCGAGGTTCAGCCGGGCC
AGAAGATTGCCATTGTAGGCCCGACTGGTGCCGGTAAAACGACACTGATTAACCTCCTGATCCGCTTCAATGAGCTGACC
GGCGGGGAGATATACATCGACGGCACTCCAATTAGCAGCTTGACCAGAGAGAACCTTCACGATCTTTTCTGTATGGTGCT
GCAGGATACCTGGATGTTTGAAGGCACGGTAAGAGAAAATCTCGTCTATAACAAAACAGGCGTGACTGATGCTGAAATGG
AAGAAGCCTGCCGTTCTGTCGGCCTGCATCATTTCATTCAGACTTTGAGCATGGGCTATGATACGGTATTGAATGACAAG
GTCAATCTCTCCGCAGGCCAGAAGCAGCAGCTTACGATCGCCCGGGCAATGCTTAAGAATGCCCCGATGCTTATTCTCGA
TGAGGCAACCAGCTCCGTGGATACGCGGACTGAGCTGCTGATCCAGCAGGCGATGGATCAGTTGATGGAAGGCCGAACCT
CGTTCGTCATCGCTCACAGGCTCTCAACCATCAAGAACGCCGATGTTATTCTGGTGCTGAAGGACGGTGACATTCTGGAA
AGCGGCAATCATCATGAGCTGCTTGCGAAGAACGGCTTCTATGCAGAGCTCTATAACAGCCAGTTTGAACAAGCCTCTTA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(364-511)

ABC transporter transmembrane region (ABC_membrane)

(25-300)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A089M7U3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

55.232

99.488

0.549

Multiple sequence alignment