Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   R70723_RS15620 Genome accession   NZ_CP009283
Coordinates   3627182..3628933 (-) Length   583 a.a.
NCBI ID   WP_039873272.1    Uniprot ID   A0A089KFS2
Organism   Paenibacillus sp. FSL R7-0273     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3622182..3633933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R70723_RS15605 (R70723_16225) - 3622661..3623731 (+) 1071 WP_039873268.1 glycosyltransferase family 4 protein -
  R70723_RS15610 (R70723_16230) cls 3623921..3625363 (+) 1443 WP_039873269.1 cardiolipin synthase -
  R70723_RS15615 (R70723_16235) rcrQ 3625422..3627182 (-) 1761 WP_039873271.1 ABC transporter ATP-binding protein Regulator
  R70723_RS15620 (R70723_16240) rcrP 3627182..3628933 (-) 1752 WP_039873272.1 ABC transporter ATP-binding protein Regulator
  R70723_RS15625 (R70723_16245) - 3629080..3630141 (-) 1062 WP_231574893.1 HAMP domain-containing sensor histidine kinase -
  R70723_RS15630 (R70723_16250) - 3630138..3630812 (-) 675 WP_039873273.1 response regulator transcription factor -
  R70723_RS33420 - 3630956..3631123 (+) 168 WP_156123820.1 hypothetical protein -
  R70723_RS15635 (R70723_16260) - 3631212..3631862 (-) 651 WP_039873275.1 TetR/AcrR family transcriptional regulator -
  R70723_RS15640 (R70723_16265) - 3631855..3633057 (-) 1203 WP_039873276.1 MFS transporter -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 63572.82 Da        Isoelectric Point: 6.8633

>NTDB_id=128127 R70723_RS15620 WP_039873272.1 3627182..3628933(-) (rcrP) [Paenibacillus sp. FSL R7-0273]
MIKLLKNLEAKEWGLFVISVLFIVAQVWLDLELPDYMSDITRLIQTPGSEMSEIAATGGWMLLCALGSLATSIVVAGIAA
KIAANFSARVRSKLFNKVQSFSMEEINSFSTASLITRSTNDITQVQMLIVIGLQLLIKAPLLAVWAILKITGKSWEWSLA
TGAAVGVLIVIVGICVVLVLPKFQKLQVLTDNLNRVARENLTGLRVIRAYNAEKYQEDKFGAANNELTRTNLFANNVLSA
MMPSITLIMSGLSLAIYWIGAVMIQNAGAGAKMGLFSDMIVFSSYAMQVVMAFMMLIIIFILMPRAHVSAKRINEVLDTK
PSLTDGSLTASPSWHAGEVEFRNVSFKYPDAEEYVLKNISFTAKKGETVAFIGSTGCGKSTVVNLIPRFYDASSGEILVG
GVNVNQYEQSALRNKMGYVSQKAVLFGGTVTSNIAFGDNGRDLNSDVVDAVYTSQAADFVEKMDGSYDAHIAQGGTNLSG
GQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKESRGTTMLIVAQRIGTIKDADKIIVLEAGEIAGMGTHD
ELMESCSIYQEIAYSQLSKEELA

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=128127 R70723_RS15620 WP_039873272.1 3627182..3628933(-) (rcrP) [Paenibacillus sp. FSL R7-0273]
ATGATTAAACTGCTTAAGAACCTTGAAGCAAAGGAATGGGGCCTGTTCGTAATCAGCGTCCTCTTCATTGTCGCCCAGGT
ATGGCTCGATCTGGAGCTGCCCGATTATATGAGCGACATCACCCGGCTGATTCAGACCCCCGGAAGTGAGATGTCCGAGA
TTGCCGCCACCGGCGGCTGGATGCTACTCTGTGCGTTGGGCAGTCTTGCCACTTCCATTGTCGTAGCCGGGATTGCGGCA
AAAATTGCCGCCAATTTCTCAGCCAGAGTCCGTTCCAAATTGTTCAACAAGGTTCAATCCTTCTCGATGGAGGAAATCAA
CAGCTTCTCAACCGCAAGTCTGATCACCCGTTCAACCAATGACATTACCCAGGTGCAGATGCTGATTGTTATCGGCCTGC
AGCTGCTGATCAAGGCTCCGCTGCTGGCCGTATGGGCGATCCTCAAGATCACCGGCAAGAGCTGGGAGTGGTCGCTGGCC
ACAGGCGCTGCCGTCGGCGTGTTAATTGTTATTGTCGGTATTTGTGTCGTGCTGGTGCTGCCGAAATTCCAGAAGCTGCA
GGTGCTGACAGATAATCTGAACCGGGTGGCCCGGGAGAATCTTACCGGACTGCGTGTCATCCGTGCCTATAATGCCGAGA
AATACCAGGAGGACAAATTCGGAGCAGCCAACAATGAGCTGACCCGGACGAACCTGTTCGCCAACAATGTATTATCCGCC
ATGATGCCGAGCATTACGCTGATTATGAGCGGCCTTAGCCTGGCGATATACTGGATCGGTGCGGTCATGATTCAAAATGC
CGGTGCCGGCGCCAAAATGGGCCTTTTCTCTGACATGATTGTCTTCTCCTCCTACGCCATGCAGGTCGTAATGGCCTTCA
TGATGCTGATCATTATCTTTATTCTCATGCCACGTGCACATGTTTCCGCCAAGCGGATTAACGAGGTGCTGGATACTAAG
CCAAGCCTGACTGACGGTTCGCTCACCGCCTCCCCTTCCTGGCATGCAGGTGAAGTGGAATTCCGGAATGTCAGCTTCAA
ATACCCGGATGCCGAGGAATATGTGCTGAAGAACATCAGCTTTACCGCCAAAAAAGGTGAAACCGTAGCGTTTATCGGAT
CAACCGGCTGCGGCAAGAGTACCGTCGTTAACCTGATTCCCCGCTTCTATGATGCCTCTTCCGGTGAAATTCTTGTCGGC
GGCGTTAATGTAAATCAATATGAGCAGAGCGCCCTGCGTAATAAAATGGGTTATGTCTCACAAAAAGCCGTCCTGTTCGG
CGGTACCGTTACTTCAAATATTGCCTTCGGCGATAACGGCCGTGACCTGAATTCCGATGTAGTCGATGCGGTCTATACTT
CACAGGCTGCCGATTTCGTCGAGAAAATGGATGGCAGCTACGATGCGCACATTGCCCAGGGCGGAACCAACCTGTCCGGC
GGCCAGAAGCAGCGGCTGTCCATAGCGCGGGCCATCGCCCGCCGTCCGGAGATTCTGATCTTTGACGACTCCTTCTCGGC
GCTTGACTACAAGACAGACCGCAAGCTGCGCAGTGAGCTGAAGAAGGAATCACGCGGCACCACGATGCTGATTGTCGCAC
AGCGGATTGGCACCATTAAGGATGCTGACAAGATCATCGTCCTTGAAGCCGGAGAAATCGCCGGTATGGGGACCCATGAT
GAACTGATGGAATCCTGCAGCATTTATCAGGAAATTGCTTATTCACAGCTGTCGAAGGAGGAGCTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-504)

ABC transporter transmembrane region (ABC_membrane)

(17-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A089KFS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.181

100

0.533

Multiple sequence alignment