Detailed information NTG0128050

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: R50345_RS06350
• Genome accession: NZ_CP009281
• Coordinates: 1415183..1416130 (+)
• Length: 315 a.a.
• NCBI ID: WP_042125010.1
• Uniprot ID: A0A089IDW0
• Organism: Paenibacillus sp. FSL R5-0345
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1410183..1421130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R50345_RS06320 (R50345_06505)	-	1410348..1411214 (+)	867	WP_042124998.1	GNAT family N-acetyltransferase	-
R50345_RS06325 (R50345_06510)	-	1411477..1412571 (-)	1095	WP_042125000.1	Xaa-Pro peptidase family protein	-
R50345_RS06330 (R50345_06515)	-	1412865..1413710 (+)	846	WP_042125002.1	SDR family oxidoreductase	-
R50345_RS06335 (R50345_06520)	-	1413732..1414235 (+)	504	WP_042125004.1	GNAT family N-acetyltransferase	-
R50345_RS06340 (R50345_06525)	-	1414254..1414598 (-)	345	WP_042125006.1	helix-turn-helix domain-containing protein	-
R50345_RS06345 (R50345_06530)	-	1414708..1414950 (+)	243	WP_149645246.1	YqkE family protein	-
R50345_RS06350 (R50345_06535)	ceuB	1415183..1416130 (+)	948	WP_042125010.1	ABC transporter permease	Machinery gene
R50345_RS06355 (R50345_06540)	-	1416133..1417077 (+)	945	WP_042125012.1	iron chelate uptake ABC transporter family permease subunit	-
R50345_RS06360 (R50345_06545)	-	1417071..1417826 (+)	756	WP_042125014.1	ABC transporter ATP-binding protein	-
R50345_RS06365 (R50345_06550)	-	1417949..1418941 (+)	993	WP_269321982.1	siderophore ABC transporter substrate-binding protein	-
R50345_RS06370 (R50345_06555)	-	1419050..1419886 (-)	837	WP_231574241.1	IS3 family transposase	-
R50345_RS31830 (R50345_06560)	-	1419802..1420200 (-)	399	WP_042123336.1	helix-turn-helix domain-containing protein	-
R50345_RS06380 (R50345_06565)	-	1420406..1420909 (+)	504	WP_042125017.1	sigma-70 family RNA polymerase sigma factor	-

Sequence

Protein

• Length: 315 a.a.
• Molecular weight: 34515.72 Da
• Isoelectric Point: 10.0524

>NTDB_id=128050 R50345_RS06350 WP_042125010.1 1415183..1416130(+) (ceuB) [Paenibacillus sp. FSL R5-0345]
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFSLTESQMQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLV
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYVFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKNLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN

Nucleotide

• Length: 948 bp

>NTDB_id=128050 R50345_RS06350 WP_042125010.1 1415183..1416130(+) (ceuB) [Paenibacillus sp. FSL R5-0345]
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTCTCATTTATATCTTTGTTTATAGGCGTAAAAGATATTTCACC
TTTGGATCTTTTTTCGCTTACGGAATCTCAGATGCAGACTCTGCTAGTCAGCCGGATTCCACGCTTAGCTGCACTGATTA
TAGCTGGTGTAAGCATGAGTATTGCCGGATTAATTATGCAGCAATTATCACGAAATAAATTCGTTTCTCCCACTACAGCG
GGCACGATGGATTCCGCGAAATTCGGTATTCTCGTGTCCCTGATGCTGTTCACAGGGGCGACGCCGATGCAGAAGCTGCT
CGTTGCTTTTGTTTTTGCCCTATTGGGAACATTTATATTTATGAGAATCTTGGATCGGATCAAGTTCAAGGATAGTATTT
TCATCCCGCTGGTCGGACTCATGTTCGGGAACATTGTAGGCTCGATTACTACATTTTTTGCTTACAAAAATGATTTGGTT
CAGAATATCTCGTCTTGGATGCTTGGCGATTTCTCAACGATTATTAAGGGTCAATACGAATTAATCTATATCAGTATTCC
GCTTGTTATTCTCGCGTATGTTTTCGCCAATAAGTTCACCGTTGCCGGTATGGGGGAGGATTTCTCCGTTAATCTCGGTA
TGAACTACAAAGCGGTTGTGAACGTAGGATTGGTGATTGTAGCGTTAATCTCTTCAGTAGTTATTTTAACCGTAGGTACA
ATTCCTTTCCTAGGTCTTGTTGTACCTAACATAGTAACGCTATACATAGGCGATAACTTGAAAAAAAATCTGGCGCATAC
TGCCATTCTCGGCGCGGTGTTCCTCCTGTTCTGTGATATTCTGGGCAGGCTCATTATATATCCATACGAAATATCAATCA
GTCTCACGGTAGGCGTCATCGGAAGTGGTCTGTTTATCTACTTGCTGATGAGAAGAAAGGCGAATTAG

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (9-311)

3D structure

• AlphaFold DB: A0A089IDW0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	56.051	99.683	0.559