Detailed information NTG0128016

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SpyM6D471_RS03625
• Genome accession: NZ_CP011415
• Coordinates: 717329..719539 (+)
• Length: 736 a.a.
• NCBI ID: WP_011184445.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain D471
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 712329..724539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SpyM6D471_RS09175	-	712476..712652 (-)	177	WP_002984898.1	DUF3042 family protein	-
SpyM6D471_RS03600 (SpyM6D471_03595)	miaA	712786..713685 (+)	900	WP_011184442.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SpyM6D471_RS03605 (SpyM6D471_03600)	hflX	713758..714996 (+)	1239	WP_027968932.1	GTPase HflX	-
SpyM6D471_RS03610 (SpyM6D471_03605)	-	714989..715624 (+)	636	WP_011184444.1	cystathionine beta-lyase	-
SpyM6D471_RS03615 (SpyM6D471_03610)	rnz	715639..716568 (+)	930	WP_009881223.1	ribonuclease Z	-
SpyM6D471_RS03620 (SpyM6D471_03615)	-	716568..717332 (+)	765	WP_002984893.1	SDR family oxidoreductase	-
SpyM6D471_RS03625 (SpyM6D471_03620)	recJ	717329..719539 (+)	2211	WP_011184445.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SpyM6D471_RS03630 (SpyM6D471_03625)	-	719689..720207 (+)	519	WP_002990109.1	adenine phosphoribosyltransferase	-
SpyM6D471_RS03635 (SpyM6D471_03630)	-	720288..720971 (+)	684	WP_011184446.1	DnaD domain-containing protein	-
SpyM6D471_RS03640 (SpyM6D471_03635)	nth	720968..721624 (+)	657	WP_002990106.1	endonuclease III	-
SpyM6D471_RS03645 (SpyM6D471_03640)	-	721696..722382 (+)	687	WP_002990104.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
SpyM6D471_RS03650 (SpyM6D471_03645)	-	722372..723160 (+)	789	WP_002984887.1	Nif3-like dinuclear metal center hexameric protein	-
SpyM6D471_RS03655 (SpyM6D471_03650)	-	723200..724306 (+)	1107	WP_011184448.1	FAD-binding oxidoreductase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82571.47 Da
• Isoelectric Point: 4.7553

>NTDB_id=128016 SpyM6D471_RS03625 WP_011184445.1 717329..719539(+) (recJ) [Streptococcus pyogenes strain D471]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDELLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKYPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=128016 SpyM6D471_RS03625 WP_011184445.1 717329..719539(+) (recJ) [Streptococcus pyogenes strain D471]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGCTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTATCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAAGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTAGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGATCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAATATCCTTATTATTTGACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTACCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHHA1 domain (DHHA1) (317-435)

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.008	100	0.632
recJ	Bacillus subtilis subsp. subtilis str. 168	34.738	100	0.37