Detailed information NTG0127928

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SpyM6JRS4_RS04565
• Genome accession: NZ_CP011414
• Coordinates: 924791..925861 (+)
• Length: 356 a.a.
• NCBI ID: WP_027968836.1
• Uniprot ID: Q5XC26
• Organism: Streptococcus pyogenes JRS4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 919791..930861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SpyM6JRS4_RS04545 (SpyM6JRS4_04540)	-	920784..921482 (+)	699	WP_002989743.1	GntR family transcriptional regulator	-
SpyM6JRS4_RS04550 (SpyM6JRS4_04545)	-	921580..921912 (+)	333	WP_002989745.1	putative DNA-binding protein	-
SpyM6JRS4_RS04555 (SpyM6JRS4_04550)	ffh	921927..923489 (+)	1563	WP_011017792.1	signal recognition particle protein	-
SpyM6JRS4_RS04560 (SpyM6JRS4_04555)	-	923624..924322 (-)	699	WP_011184534.1	helix-turn-helix transcriptional regulator	-
SpyM6JRS4_RS04565 (SpyM6JRS4_04560)	xerS	924791..925861 (+)	1071	WP_027968836.1	tyrosine recombinase XerS	Machinery gene
SpyM6JRS4_RS04570 (SpyM6JRS4_04565)	-	926560..927042 (+)	483	WP_011184531.1	PASTA domain-containing protein	-
SpyM6JRS4_RS04575 (SpyM6JRS4_04570)	citC	927131..928183 (+)	1053	WP_011184530.1	[citrate (pro-3S)-lyase] ligase	-
SpyM6JRS4_RS04580 (SpyM6JRS4_04575)	-	928293..929687 (-)	1395	WP_021340040.1	oxaloacetate decarboxylase subunit alpha	-
SpyM6JRS4_RS04585 (SpyM6JRS4_04580)	citX	929702..930280 (-)	579	WP_011888860.1	citrate lyase holo-[acyl-carrier protein] synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41487.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=127928 SpyM6JRS4_RS04565 WP_027968836.1 924791..925861(+) (xerS) [Streptococcus pyogenes JRS4]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIISLLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=127928 SpyM6JRS4_RS04565 WP_027968836.1 924791..925861(+) (xerS) [Streptococcus pyogenes JRS4]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTATAAGGCCATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAGTTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGTCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTATAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGAGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTTCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (177-344)

3D structure

• AlphaFold DB: Q5XC26

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.337	100	0.803