Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | CPAST_RS21065 | Genome accession | NZ_CP009267 |
| Coordinates | 840577..840741 (+) | Length | 54 a.a. |
| NCBI ID | WP_257786243.1 | Uniprot ID | - |
| Organism | Clostridium pasteurianum DSM 525 = ATCC 6013 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 835577..845741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPAST_RS21585 (CPAST_c07600) | - | 835698..836177 (+) | 480 | WP_257786242.1 | RHS repeat-associated core domain-containing protein | - |
| CPAST_RS03670 (CPAST_c07610) | - | 836203..836532 (+) | 330 | WP_003441125.1 | transposase | - |
| CPAST_RS03675 (CPAST_c07620) | - | 836577..837458 (+) | 882 | WP_003441126.1 | IS3 family transposase | - |
| CPAST_RS03680 (CPAST_c07630) | - | 837571..838017 (+) | 447 | WP_003446350.1 | DUF2691 family protein | - |
| CPAST_RS03685 (CPAST_c07640) | - | 837986..838333 (+) | 348 | WP_003446349.1 | hypothetical protein | - |
| CPAST_RS20015 (CPAST_c07650) | - | 838595..839500 (+) | 906 | WP_003446348.1 | RHS repeat-associated core domain-containing protein | - |
| CPAST_RS03695 (CPAST_c07660) | - | 839541..839894 (+) | 354 | WP_236900378.1 | immunity 53 family protein | - |
| CPAST_RS03700 (CPAST_c07670) | - | 840054..840398 (+) | 345 | WP_003446346.1 | hypothetical protein | - |
| CPAST_RS21065 | nucA/comI | 840577..840741 (+) | 165 | WP_257786243.1 | hypothetical protein | Machinery gene |
| CPAST_RS03710 (CPAST_c07680) | - | 840768..841415 (+) | 648 | WP_003446344.1 | DUF2625 family protein | - |
| CPAST_RS03715 (CPAST_c07690) | - | 841763..842617 (+) | 855 | WP_003446342.1 | hypothetical protein | - |
| CPAST_RS03720 (CPAST_c07700) | - | 842714..843487 (+) | 774 | WP_003446340.1 | hypothetical protein | - |
| CPAST_RS22000 (CPAST_c07710) | - | 843647..844069 (+) | 423 | WP_003446338.1 | DUF4351 domain-containing protein | - |
| CPAST_RS03730 (CPAST_c07720) | - | 844287..845105 (+) | 819 | WP_003446336.1 | alpha/beta hydrolase | - |
| CPAST_RS03735 (CPAST_c07730) | - | 845438..845719 (+) | 282 | WP_003446334.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 54 a.a. Molecular weight: 5830.71 Da Isoelectric Point: 12.1548
>NTDB_id=127901 CPAST_RS21065 WP_257786243.1 840577..840741(+) (nucA/comI) [Clostridium pasteurianum DSM 525 = ATCC 6013]
MSRHKYPSAMFRKGGMGASVRPFSPSDNRGAGSALGHKLRAFPDGTRVRIKIGD
MSRHKYPSAMFRKGGMGASVRPFSPSDNRGAGSALGHKLRAFPDGTRVRIKIGD
Nucleotide
Download Length: 165 bp
>NTDB_id=127901 CPAST_RS21065 WP_257786243.1 840577..840741(+) (nucA/comI) [Clostridium pasteurianum DSM 525 = ATCC 6013]
ATTTCAAGACATAAATATCCTTCAGCAATGTTTAGAAAAGGTGGAATGGGAGCGAGTGTAAGACCATTTTCACCTTCTGA
TAATAGAGGAGCTGGTTCTGCATTAGGTCATAAATTAAGAGCATTCCCAGATGGAACAAGAGTAAGAATTAAAATTGGTG
ATTAA
ATTTCAAGACATAAATATCCTTCAGCAATGTTTAGAAAAGGTGGAATGGGAGCGAGTGTAAGACCATTTTCACCTTCTGA
TAATAGAGGAGCTGGTTCTGCATTAGGTCATAAATTAAGAGCATTCCCAGATGGAACAAGAGTAAGAATTAAAATTGGTG
ATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
56 |
92.593 |
0.519 |