Detailed information NTG0127867

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JV59_RS14305
• Genome accession: NZ_CP009264
• Coordinates: 3059538..3060545 (-)
• Length: 335 a.a.
• NCBI ID: WP_006963339.1
• Uniprot ID: A0A097QNP8
• Organism: Vibrio coralliilyticus strain OCN014
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3054538..3065545

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JV59_RS14275 (JV59_38325)	frdC	3055115..3055498 (+)	384	WP_038513905.1	fumarate reductase subunit FrdC	-
JV59_RS14280 (JV59_38330)	frdD	3055511..3055888 (+)	378	WP_038513908.1	fumarate reductase subunit FrdD	-
JV59_RS14285 (JV59_38335)	-	3055948..3056631 (-)	684	WP_038513911.1	nitroreductase family protein	-
JV59_RS14290 (JV59_38340)	hslU	3056796..3058130 (-)	1335	WP_038513914.1	HslU--HslV peptidase ATPase subunit	-
JV59_RS14295 (JV59_38345)	hslV	3058168..3058713 (-)	546	WP_006963336.1	ATP-dependent protease subunit HslV	-
JV59_RS14300 (JV59_38350)	-	3058875..3059423 (-)	549	WP_038513917.1	SPOR domain-containing protein	-
JV59_RS14305 (JV59_38355)	cytR	3059538..3060545 (-)	1008	WP_006963339.1	DNA-binding transcriptional regulator CytR	Regulator
JV59_RS14310 (JV59_38360)	priA	3060794..3062995 (-)	2202	WP_038513921.1	primosomal protein N'	-
JV59_RS14315 (JV59_38365)	rpmE	3063286..3063504 (+)	219	WP_006963341.1	50S ribosomal protein L31	-
JV59_RS14320 (JV59_38370)	-	3063756..3065033 (+)	1278	WP_038513924.1	malic enzyme-like NAD(P)-binding protein	-
JV59_RS14325 (JV59_38375)	metJ	3065123..3065443 (-)	321	WP_006963343.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36965.58 Da
• Isoelectric Point: 6.0455

>NTDB_id=127867 JV59_RS14305 WP_006963339.1 3059538..3060545(-) (cytR) [Vibrio coralliilyticus strain OCN014]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPSSAVLCQFRYQGYQQALRRAGISMNPNYCIYGDFSFEDGAKAVRQLLALPEPPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=127867 JV59_RS14305 WP_006963339.1 3059538..3060545(-) (cytR) [Vibrio coralliilyticus strain OCN014]
ATGGCGACAATGAAGGATGTTGCTCAGCTAGCAGGCGTTTCAACTGCAACAGTATCGCGTGCTCTAATGAACCCGGAAAA
AGTATCTTCAGCTACAAGGAAGCGAGTAGAAGATGCAGTATTAGAAGCCGGATATTCACCAAATTCTCTGGCGCGCAACC
TGCGCCGAAATGAGTCCAAAACCATAATTGCAATTATCCCGGATATTTGTGATCCCTACTACACAGAGATCATCCGTGGA
ATTGAAGACGCTGCGATGGAACATGGATACATCGTGCTGCTGGGAGACAGTGGTCAGCAGAAAAAGCGTGAGAGTTCTTT
TGTCAATCTTGTCTTTACTAAGCAGGCCGATGGAATGTTGCTGCTTGGTACTGATCTGCCGTTTGACGTCAGCAAACCTG
AGCAGAAAAACCTGCCGCCTATGGTGATGGCGTGTGAGTTTGCACCTGAGCTGGAACTGCCAACGGTACACATTGATAAC
CTGACATCGGCATTTGAAGCGGTGAACTATCTTACGCAGATGGGTCACAAGCGCATTGCTCAGATTTCGGGTCCTAGTTC
TGCGGTACTATGCCAGTTCCGCTACCAAGGGTACCAGCAAGCGCTACGCCGAGCTGGCATCAGTATGAACCCAAATTACT
GCATCTACGGTGATTTCTCGTTTGAAGATGGTGCGAAAGCCGTCAGACAATTGTTGGCTTTACCTGAGCCGCCAACCGCG
ATTTTCTGTCACAACGATGCGATGGCCATCGGGGCGATTCAAGAAGCGAAGAAGCTGGGTTTGCGCGTCCCGCAAGATCT
GTCAGTCGTTGGCTTTGATGATATTCAGTTTGCTCAGTACTGCGATCCACCACTGACGACGATTTCTCAGCCACGTTACG
AGATTGGCCGACAGGCAATGTTGATGATGCTTGAGTTGTTGCGCGGCCATGATGTTCGTGCCGGTTCTCGATTGCTGGAA
ACTCAGCTGGTTGTCAGGGAAAGCGCTGCTCCACCGCGAGTCATCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A097QNP8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.771	99.104	0.919
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896