Detailed information NTG0127850

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: JV59_RS01675
• Genome accession: NZ_CP009264
• Coordinates: 331691..335077 (-)
• Length: 1128 a.a.
• NCBI ID: WP_038509717.1
• Uniprot ID: -
• Organism: Vibrio coralliilyticus strain OCN014
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 326691..340077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JV59_RS01660 (JV59_01640)	-	327137..328162 (-)	1026	WP_038163377.1	ABC transporter permease	-
JV59_RS01665 (JV59_01645)	-	328165..329151 (-)	987	WP_006958093.1	ABC transporter permease	-
JV59_RS01670 (JV59_01650)	-	329322..331004 (-)	1683	WP_006958092.1	ABC transporter substrate-binding protein	-
JV59_RS01675 (JV59_01655)	chiS	331691..335077 (-)	3387	WP_038509717.1	response regulator	Regulator
JV59_RS01680 (JV59_01660)	rsmC	335272..336294 (-)	1023	WP_038514567.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
JV59_RS01685 (JV59_01665)	-	336373..337458 (-)	1086	WP_038509720.1	AI-2E family transporter	-
JV59_RS01690 (JV59_01670)	hemL	337723..339015 (-)	1293	WP_038509723.1	glutamate-1-semialdehyde 2,1-aminomutase	-
JV59_RS01695 (JV59_26605)	erpA	339271..339612 (+)	342	WP_019276906.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127142.00 Da
• Isoelectric Point: 6.2534

>NTDB_id=127850 JV59_RS01675 WP_038509717.1 331691..335077(-) (chiS) [Vibrio coralliilyticus strain OCN014]
MFKLYRKQRFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLISVRDSKQQQVTDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDMAQAREYAQRRYIPGSGDQIKTSILPQSNVYTGTERYRLLHKRYHRAYLELLKRSDF
DDALLVDLEGNVTYSIFKHDNYGTNLLTGRFRDTNLGRTFHKLKTQVTEKRKSNEDYTPVIISDFEMDRGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHKSRTMAYEQKDIDKSREVVDLALEGKTDVGTYTNTLGEA
TIAAYSPISFKGVDWAIVVEVPEKEAFARVHQLETLFVFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAISFERMQRSIRDKILLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSTHLVGNKPIRI
INQVPNDPLWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPAEQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASPEQIGLASHIEGAHFIAPENNDLEIIEGSNLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKNGEEAVESVGHEKPELMLLDIMMPGMSGYQVCEVLRKDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQTELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKIRFTNDAASRLFKRTTEQLRRSNADELIAPKFLNVEQPHYCGVIDVYVEDVRQHLSADILKLPQGS
GLKSMYIFNVGGSVNAARINNLETAVEALSSYAFEGDKAKLQELKELGGEFTRLADRATTDNKSKQEVMREVLVDAMTSA
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIESLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=127850 JV59_RS01675 WP_038509717.1 331691..335077(-) (chiS) [Vibrio coralliilyticus strain OCN014]
ATGTTTAAGTTGTACCGAAAACAAAGATTTAAGCGCCTGCAACACACTTTAATGCTGGCATTTCTTGTATTGAGTATTAC
GCCACTCACGATCATCGCGATCTTTTTCCTCCAGTCTCATACCAAAGATTTGCAGGAGCAAAGTACTTCGCACTTAATCT
CCGTACGAGACAGTAAACAACAACAAGTCACTGACTACATGTACGCCAAAGAATCGGAAGTTATGGGCTTTGTTCGCTCT
GAACTGGCTTATGCCAGTGGCGGGCGTTTCTACGGCTTAGTCAATGCGTTTCGTAGCTTAGGCCTGGATATGGCTCAGGC
GCGCGAGTACGCACAGCGGCGCTACATTCCTGGCTCAGGCGATCAGATCAAAACCTCAATACTTCCTCAGTCCAATGTTT
ATACTGGCACTGAGCGCTATCGGCTGCTACATAAACGCTATCACAGAGCCTATCTGGAACTGCTCAAACGCTCAGACTTT
GACGACGCTTTGCTGGTTGATTTAGAAGGTAACGTCACCTACTCCATCTTTAAACACGACAACTACGGCACCAACCTGCT
TACTGGCCGCTTTCGTGATACCAATCTAGGCAGAACCTTCCACAAGCTGAAAACTCAGGTTACTGAAAAGCGTAAATCCA
ATGAAGATTACACACCAGTAATCATTTCAGACTTTGAGATGGACAGAGGTAAACCTGTCGCGTGGCTCGGCGCTCCCATC
GTTCAGCAAGGTTATCTCCACAGCTACGCCATGTTCCGTTTACCAAACAATGGCATCACTAAGCTAATAGCTGATACCAA
CAACGCTTCAGCAATGAAAACTTTACTGGTAGGTGCTGACCATAAATCAAGAACCATGGCGTATGAGCAAAAAGACATCG
ACAAGAGCCGCGAAGTTGTTGATTTAGCATTGGAAGGAAAAACCGATGTCGGGACATACACAAACACGCTCGGAGAAGCG
ACCATCGCCGCTTATAGCCCGATTTCGTTTAAGGGTGTCGACTGGGCCATTGTGGTAGAAGTGCCAGAAAAAGAAGCTTT
TGCACGCGTCCACCAACTCGAAACTCTGTTTGTATTTGCCATGCTATGTGCAATTGTACTGGTGGTTGCCGCGTCCCATT
ACTTATCTAACTTTATTACCGCACCTTTATTGAAGTTGACGTGGGCGGCAGAAAAAGTCTCGGCTGGCGATCTCGATACG
GACATCATCAATACAGAGCGAAAAGATGAGATAGGCCGACTCGCCATCAGTTTTGAGCGCATGCAACGCTCCATTCGCGA
TAAAATACTGCTCATAAAACAGCAAAATGAAGAGCTGGAAAGCAACCTAAAGCTGATCCAAAAGCAAAATGACGAGCTGC
AATTGGCAAACAAACTCAAAGATGAGTTCCTCGCCACCACCTCTCATGAATTGCGAACTCCACTCCATGGCATGGTAGGT
ATCGCAGAAGCGCTAATCTCCGGAGCCAATGGGCCCATTACCGCGGATCACAAGTACCAGCTCGATATCATCATCAGTAG
CGGCCAGCGCTTGGCCACCTTGGTTGATGACCTGCTTGATTACCACAAAATGCGTTACGGTAATCTCGATATTGAAACCC
GAGCTGTGGATATCTCCGGAGCAACGCGCTTGGTGCTCGAACTGTCGACTCACTTAGTGGGCAACAAACCCATTCGCATC
ATTAATCAGGTTCCTAACGATCCGCTATGGGTATGCGCCGACCCTCAACGCTTAGAACAAGTGCTATACAACCTCGTTGG
CAACGCAATCAAATACACCAGTGAGGGTAAAATCGTCATTTCCGCCACTCAAGTCGACGACAACATCCGCGTTCAAGTAG
TAGATACTGGTCAGGGGATCCCAGCAGAGCAACTAGAGCACATTTTTGAACCCCTGATTCAGGCTGGCAGTGATAGCAGC
CGTTATCGCCAAGGGGCCGGTCTTGGTCTATCTATCAGTCGTCAGTTGATTGATTTGATGCAAGGCACTCTTTACGTCAG
CAGCCAGCCTATGGTTGGTACGACATTTAGCTTCACTTTGCCAATCGCCTCACCCGAGCAAATAGGCCTCGCAAGCCATA
TCGAAGGCGCGCATTTCATTGCTCCAGAAAACAATGACCTAGAAATAATCGAAGGCTCAAATTTACCGGAAAATCCAGAC
GGGCCATTGCTGTTAGTGGTCGATGATGAACCGGTCAATCTGCGTGTCTTAGACAGCTTCCTTCGCCTTGAAGGCTACCG
AGTACGCACAGCGAAAAATGGTGAAGAAGCCGTTGAATCCGTTGGTCATGAAAAACCAGAACTGATGCTACTCGATATCA
TGATGCCGGGAATGAGCGGCTATCAGGTGTGTGAAGTGCTGCGTAAAGACTATGATCATGCTCAGCTCCCCGTCATCATG
CTCACAGCATTGAATCAACCCGATGACAGAGTTCGAGGTTTCGAAGCCGGAGCCAATGACTACTTATCAAAACCTTTTAA
CAAACAAGAGCTCGCCGCACGGATTACGGCGCATCTAACCGCAAGCAAAGCCGAACAACGCCGGATTGAAAACCAGCAAC
TACAAACTGAGCTTAAGCAGCGCGCCATGGTTGAAGCCAGTTTACTGGAAACTCAGGGACGTCTATTAGAGCAATTAGAA
TCAGCCCCAGAAGCGATTATCTGTGTACGTGACGACAATAAAATCCGCTTCACCAATGATGCAGCCTCTCGTCTATTTAA
GCGCACTACAGAACAATTACGCCGTTCTAATGCGGATGAATTGATTGCACCAAAATTCCTTAACGTCGAACAACCGCACT
ACTGTGGCGTCATTGATGTTTATGTCGAAGATGTCCGCCAGCACTTGTCCGCAGACATTCTCAAACTACCACAAGGCTCT
GGCCTCAAATCCATGTACATCTTTAACGTGGGTGGCAGTGTCAACGCCGCGCGGATCAATAACCTCGAAACCGCGGTTGA
AGCCTTGTCCAGCTACGCGTTTGAAGGTGATAAAGCCAAACTGCAAGAGTTAAAAGAGCTAGGTGGAGAGTTTACGCGGT
TGGCCGATCGAGCCACCACTGATAACAAGTCCAAGCAAGAAGTCATGCGTGAAGTCTTAGTCGATGCAATGACAAGTGCG
CTAACTTATTGGGAAAGCGTTACTGGTCAAAGCAAGTTTGCTTTCGCAGAGCAAAGCGGCTTATGGCGTGTGTACCTCGA
CCGTAGCACCTTACAGACTCGGACTCTGGACAAATACCTGCGAGTCGAAACGTTACCAAAAACACCGCGCTGGCGAACGG
TACTGAGCTCTCTGGAGTACATCCTTGAACACTGTAAAGAGATGAGCCCAGAGCGCACTCATATTGAGAGCCTACGCGAT
AAGCTGCAACACCTCCTAACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.255	100	0.793