Detailed information NTG0127829

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: VV93_RS13920
• Genome accession: NZ_CP009261
• Coordinates: 3029671..3030678 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 93U204
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3024671..3035678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV93_RS13900 (VV93_v1c27370)	metJ	3024778..3025095 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
VV93_RS13905 (VV93_v1c27380)	-	3025182..3026459 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
VV93_RS13910 (VV93_v1c27390)	rpmE	3026736..3026957 (-)	222	WP_011151292.1	50S ribosomal protein L31	-
VV93_RS13915 (VV93_v1c27400)	priA	3027238..3029442 (+)	2205	WP_039554854.1	primosomal protein N'	-
VV93_RS13920 (VV93_v1c27410)	cytR	3029671..3030678 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
VV93_RS13925 (VV93_v1c27420)	-	3030788..3031345 (+)	558	WP_011151294.1	SPOR domain-containing protein	-
VV93_RS13930 (VV93_v1c27430)	hslV	3031497..3032051 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
VV93_RS13935 (VV93_v1c27440)	hslU	3032079..3033410 (+)	1332	WP_039554856.1	HslU--HslV peptidase ATPase subunit	-
VV93_RS13940 (VV93_v1c27450)	-	3033576..3034493 (+)	918	WP_011079330.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
VV93_RS13945 (VV93_v1c27460)	rraA	3034569..3035090 (+)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
VV93_RS13950 (VV93_v1c27470)	zapB	3035312..3035554 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=127829 VV93_RS13920 WP_011079334.1 3029671..3030678(+) (cytR) [Vibrio vulnificus strain 93U204]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=127829 VV93_RS13920 WP_011079334.1 3029671..3030678(+) (cytR) [Vibrio vulnificus strain 93U204]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875