Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | U069_RS00545 | Genome accession | NZ_CP011343 |
| Coordinates | 117024..117464 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli K-12 substr. GM4792 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 112024..122464
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U069_RS00525 (U069_c0760) | coaE | 112514..113134 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| U069_RS25770 | - | 113159..113203 (+) | 45 | WP_120795372.1 | protein YacM | - |
| U069_RS00530 (U069_c0761) | guaC | 113359..114402 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| U069_RS00535 (U069_c0762) | hofC | 114437..115639 (-) | 1203 | WP_000157266.1 | protein transport protein HofC | - |
| U069_RS00540 (U069_c3560) | pilB | 115629..117014 (-) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| U069_RS00545 (U069_c0763) | pilA | 117024..117464 (-) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| U069_RS00555 (U069_c0764) | nadC | 117667..118560 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| U069_RS00560 (U069_c0765) | ampD | 118648..119199 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| U069_RS00565 (U069_c0766) | ampE | 119196..120050 (+) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| U069_RS00570 (U069_c0767) | aroP | 120093..121466 (-) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=127724 U069_RS00545 WP_000360904.1 117024..117464(-) (pilA) [Escherichia coli K-12 substr. GM4792]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=127724 U069_RS00545 WP_000360904.1 117024..117464(-) (pilA) [Escherichia coli K-12 substr. GM4792]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |