Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | IX88_RS03520 | Genome accession | NZ_CP009256 |
| Coordinates | 737332..737658 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain AB31 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 732332..742658
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX88_RS03495 (IX88_03535) | hemC | 732949..733866 (+) | 918 | WP_002159654.1 | hydroxymethylbilane synthase | - |
| IX88_RS03500 (IX88_03540) | - | 733871..734638 (+) | 768 | WP_000897410.1 | uroporphyrinogen-III synthase | - |
| IX88_RS03505 (IX88_03545) | - | 734647..735486 (+) | 840 | WP_001230201.1 | hypothetical protein | - |
| IX88_RS03510 (IX88_03550) | - | 735496..736689 (+) | 1194 | WP_031999578.1 | hypothetical protein | - |
| IX88_RS03515 (IX88_03555) | - | 736697..737137 (+) | 441 | WP_000661569.1 | thioesterase family protein | - |
| IX88_RS03520 (IX88_03560) | hns | 737332..737658 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| IX88_RS03525 (IX88_03565) | gspN | 737991..738734 (+) | 744 | WP_032000769.1 | type II secretion system protein N | - |
| IX88_RS03530 (IX88_03570) | - | 738734..739570 (+) | 837 | WP_000870031.1 | type II secretion system protein N | - |
| IX88_RS03535 (IX88_03575) | gspD | 739612..741882 (+) | 2271 | WP_038405424.1 | type II secretion system secretin GspD | - |
| IX88_RS03540 (IX88_03580) | - | 741923..742552 (+) | 630 | WP_032000767.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=127664 IX88_RS03520 WP_000801427.1 737332..737658(+) (hns) [Acinetobacter baumannii strain AB31]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=127664 IX88_RS03520 WP_000801427.1 737332..737658(+) (hns) [Acinetobacter baumannii strain AB31]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |