Detailed information    

experimental Experimentally validated

Overview

Name   lpp3030   Type   Unclear
Locus tag   LPP_RS15290 Genome accession   NC_006368
Coordinates   3450499..3452091 (-) Length   530 a.a.
NCBI ID   WP_014844990.1    Uniprot ID   Q5X0R6
Organism   Legionella pneumophila str. Paris     
Function   require for natural transformation   
Unclear

Function

Participate in natural transformation with unknown function.


Genomic Context

Location: 3445499..3457091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPP_RS15265 (lpp3025) - 3445885..3446601 (+) 717 WP_027229307.1 methyltransferase -
  LPP_RS15270 (lpp3026) - 3446854..3447165 (+) 312 WP_010948640.1 integration host factor subunit beta -
  LPP_RS15275 (lpp3027) dcd 3447181..3447747 (-) 567 WP_010948641.1 dCTP deaminase -
  LPP_RS15280 (lpp3028) - 3447986..3448741 (-) 756 WP_011947858.1 slipin family protein -
  LPP_RS15285 (lpp3029) - 3448785..3450290 (-) 1506 WP_014844989.1 NfeD family protein -
  LPP_RS15290 (lpp3030) lpp3030 3450499..3452091 (-) 1593 WP_014844990.1 FlxA-like family protein Unclear
  LPP_RS15295 (lpp3031) - 3452394..3453365 (-) 972 WP_014844991.1 Lpg1974 family pore-forming outer membrane protein -
  LPP_RS15300 (lpp3032) - 3453438..3454307 (-) 870 WP_014844993.1 Lpg1974 family pore-forming outer membrane protein -
  LPP_RS15305 (lpp3033) - 3454473..3455342 (-) 870 WP_014844992.1 Lpg1974 family pore-forming outer membrane protein -
  LPP_RS15310 (lpp3034) - 3455653..3456537 (-) 885 WP_014844994.1 flagellar protein MotY -

Sequence

Protein


Download         Length: 530 a.a.        Molecular weight: 57460.55 Da        Isoelectric Point: 8.4983

>NTDB_id=1276 LPP_RS15290 WP_014844990.1 3450499..3452091(-) (lpp3030) [Legionella pneumophila str. Paris]
MKFKKIILALACLSSPLYADQDQQLKSEIQRLQHQAEDLQAQLNRLQKQLANHKSSQQKHEQQAAAKPAEPKSKPTTKSG
AAIEEKYHSSKVEVHAPDAHPESISFYPTALIADNRVVTYIAGTPVVSSPFLGDRPAFDGSDYIVNISSINRDVRLMQQR
RRLYRAYQKIGYPIPNMPIISLSGKTEPAATFNNPFRSTNTDGDITLGSSELDIAAALNENVEAYIAIAYDESPPAIGPR
VNNSAFNLNMGFVNIGNLDKSPLYFTAGQVYVPFGRYSSAMVSAPVTMNLARTKTRPVIFGYKSQADTGPFAAFYGYRSD
TTLGRSGVGGVNLGYIFGFDNDINGEIGGGFITSVADAGGMQSTGSNVGTTFGGFGSITNGNENVRKTKAADVHGHVGYD
RYNLTLEWVGAVQSFRPQDLSFNGQGARPQAAQAELGMTFMAFNRPASIGVGYQWTKEALALNLPKQRYIGVFNISIWKD
TVESIEYRHDIDYGLTQFANGAAPPGLVNLPTLGTGKSADTVSAQIGVFF

Nucleotide


Download         Length: 1593 bp        

>NTDB_id=1276 LPP_RS15290 WP_014844990.1 3450499..3452091(-) (lpp3030) [Legionella pneumophila str. Paris]
ATGAAGTTTAAAAAAATTATTTTGGCTCTCGCTTGTTTATCATCGCCATTATATGCGGATCAAGATCAACAACTGAAAAG
TGAAATTCAACGATTACAGCATCAAGCAGAAGATTTACAAGCCCAACTCAACCGATTACAAAAACAATTAGCAAATCATA
AAAGCTCTCAGCAAAAGCACGAGCAACAGGCTGCCGCAAAGCCTGCAGAACCAAAGAGTAAGCCGACGACTAAATCAGGG
GCTGCAATAGAAGAAAAATATCACTCATCCAAAGTCGAAGTCCATGCACCTGATGCCCATCCAGAGTCAATAAGCTTTTA
TCCAACAGCATTAATAGCCGATAACAGAGTGGTCACCTATATAGCAGGAACTCCTGTCGTAAGCTCACCATTCCTCGGAG
ACCGGCCTGCGTTTGATGGTTCCGATTATATAGTAAACATTTCCAGTATTAACCGAGATGTTCGTTTAATGCAGCAGCGA
CGACGCTTATACAGAGCTTATCAAAAAATAGGCTACCCTATCCCTAATATGCCAATTATTTCATTAAGTGGTAAAACAGA
GCCAGCTGCGACATTTAACAATCCATTTCGATCAACTAATACGGATGGTGATATTACGCTAGGCTCAAGTGAGTTGGATA
TTGCTGCTGCATTGAATGAAAATGTTGAAGCCTATATTGCAATTGCCTATGATGAAAGCCCTCCTGCAATTGGCCCACGG
GTTAATAATTCGGCATTTAATTTGAATATGGGATTTGTCAACATTGGTAACCTGGATAAAAGCCCGCTTTATTTTACTGC
AGGGCAAGTCTATGTTCCTTTTGGCCGCTATTCTAGTGCGATGGTTAGTGCGCCTGTCACAATGAATTTGGCAAGAACCA
AAACAAGGCCAGTCATTTTCGGTTATAAGTCTCAGGCTGATACCGGTCCTTTCGCTGCTTTTTATGGCTACAGAAGCGAT
ACTACACTGGGTCGTTCAGGAGTCGGGGGTGTTAATTTAGGATACATTTTCGGGTTTGATAATGACATCAATGGCGAGAT
AGGGGGCGGTTTCATTACCTCTGTTGCTGATGCAGGCGGTATGCAAAGTACTGGATCGAATGTGGGGACAACATTTGGCG
GTTTTGGCTCCATAACTAACGGTAATGAAAACGTTCGAAAAACAAAAGCTGCTGATGTTCATGGCCACGTGGGTTATGAT
CGTTATAATCTGACTTTGGAATGGGTTGGTGCCGTACAGAGTTTTAGGCCCCAGGACTTGAGTTTTAATGGCCAAGGCGC
CAGACCTCAGGCTGCGCAAGCAGAACTGGGTATGACGTTTATGGCTTTCAACAGACCGGCTTCCATAGGAGTTGGTTATC
AGTGGACAAAAGAAGCATTAGCACTAAATCTGCCGAAACAACGTTATATTGGAGTATTTAACATTTCCATTTGGAAAGAC
ACAGTGGAAAGTATTGAGTACAGGCATGATATTGATTATGGACTCACTCAGTTCGCTAATGGCGCAGCTCCTCCAGGATT
AGTCAACCTTCCAACTCTAGGCACAGGAAAATCTGCCGATACTGTTTCTGCACAAATTGGTGTGTTTTTCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5X0R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lpp3030 Legionella pneumophila strain ERS1305867

98.302

100

0.983

Multiple sequence alignment    



References

[1] Léo Hardy et al. (2021) Transposon Insertion Sequencing in a Clinical Isolate of Legionella pneumophila Identifies Essential Genes and Determinants of Natural Transformation. Journal of Bacteriology 203(3):e00548-20. [PMID: 33168636]