Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   H70357_RS11625 Genome accession   NZ_CP009241
Coordinates   2697443..2699194 (-) Length   583 a.a.
NCBI ID   WP_038589321.1    Uniprot ID   A0A089I2N5
Organism   Paenibacillus sp. FSL H7-0357     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2692443..2704194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H70357_RS11610 (H70357_12115) - 2692693..2695149 (+) 2457 WP_038589313.1 O-antigen ligase family protein -
  H70357_RS11615 (H70357_12120) - 2695314..2695556 (+) 243 WP_038589316.1 hypothetical protein -
  H70357_RS11620 (H70357_12125) rcrQ 2695683..2697443 (-) 1761 WP_038589319.1 ABC transporter ATP-binding protein Regulator
  H70357_RS11625 (H70357_12130) rcrP 2697443..2699194 (-) 1752 WP_038589321.1 ABC transporter ATP-binding protein Regulator
  H70357_RS11630 (H70357_12135) - 2699315..2700370 (-) 1056 WP_038589325.1 HAMP domain-containing sensor histidine kinase -
  H70357_RS11635 (H70357_12140) - 2700367..2701041 (-) 675 WP_038589328.1 response regulator transcription factor -
  H70357_RS11640 (H70357_12145) - 2701280..2701717 (+) 438 WP_038589331.1 LytTR family DNA-binding domain-containing protein -
  H70357_RS11645 (H70357_12150) - 2701730..2702173 (+) 444 WP_038589334.1 hypothetical protein -
  H70357_RS11650 (H70357_12155) - 2702255..2703547 (+) 1293 WP_052091983.1 amidase -

Sequence


Protein


Download         Length: 583 a.a.        Molecular weight: 63843.02 Da        Isoelectric Point: 7.1915

>NTDB_id=127535 H70357_RS11625 WP_038589321.1 2697443..2699194(-) (rcrP) [Paenibacillus sp. FSL H7-0357]
MVTILKYLKPKEWALVGFSLLFIVAQVWLDLELPGYMSDITRLIQTPGSEMSEIITAGVWMLLCALGSLATSIIVAGIAA
RTAANFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTNDITQVQMLIVIGLQLLLKAPILAVWAMLKITGKSWQWSLS
TGVAIGVLILIVGICIVLVLPKFQRLQQLTDNLNRVARENLTGLRVIRAYNAESYQEDKFGAANNELTRTNLFANNVLSM
LMPSISLIMSGLSLSIYWVGAVLIQNADGAAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILMPRAHVSAKRINEVLDTK
PSLQNGSLTSSKADRVGEVEFRNVSFKYPDAEDYVVEDISFTAKRGETVAFIGSTGCGKSTVVNLIPRFYDATAGEVLVD
GINVNQYEQSALRNKIGYVSQKAILFGGTVSSNVAFGDNGSNLASDVVDAVYTSQASDFVEKMDGSYEAHVAQGGSNLSG
GQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKEARGTTMLIVAQRIGTIKDADKIIVLEAGRVAGMGTHD
ELMQSCSIYQEIAYSQLSKEELA

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=127535 H70357_RS11625 WP_038589321.1 2697443..2699194(-) (rcrP) [Paenibacillus sp. FSL H7-0357]
ATGGTCACTATACTTAAATACTTGAAACCGAAGGAATGGGCTCTAGTCGGGTTTAGCCTCCTCTTCATTGTTGCACAGGT
ATGGCTGGATTTGGAATTGCCCGGTTATATGAGCGATATTACCCGTCTTATACAGACACCGGGAAGTGAAATGAGCGAAA
TCATTACAGCCGGAGTCTGGATGCTGCTCTGTGCCCTCGGCAGCTTAGCCACCTCCATTATTGTGGCAGGCATTGCCGCC
AGAACCGCGGCTAACTTCTCTTCAAGATTACGCTCCAAATTGTTCGATAAGGTACAGTCCTTCTCCATGGAAGAAATCAA
CAACTTTTCTACAGCCAGTCTAATTACCCGGTCAACGAATGACATAACGCAAGTGCAGATGCTGATTGTCATTGGTCTGC
AGCTGCTGTTGAAGGCTCCTATCCTGGCAGTCTGGGCGATGCTCAAGATCACTGGCAAAAGTTGGCAGTGGTCGCTCTCT
ACCGGTGTCGCTATTGGCGTGTTAATCCTGATTGTCGGCATATGTATCGTGCTCGTGCTGCCGAAATTCCAAAGATTGCA
GCAACTGACGGACAACCTTAATCGTGTTGCAAGAGAGAACCTTACCGGACTGCGTGTTATTCGCGCGTATAATGCGGAAA
GTTATCAGGAAGATAAATTTGGAGCAGCCAATAACGAGCTTACCCGGACGAATCTCTTCGCTAACAATGTATTGTCCATG
CTGATGCCGAGTATTTCTCTCATTATGAGCGGTTTAAGTCTATCTATCTATTGGGTAGGTGCTGTGTTGATTCAGAATGC
CGATGGTGCCGCGAAGATGGGCTTATTCTCCGATATGATTGTCTTCTCATCCTATGCGATGCAGGTGGTTATGGCGTTCA
TGATGTTGATCATGATTTTTATTTTAATGCCCCGCGCCCATGTCTCTGCCAAACGAATCAACGAAGTGCTGGATACTAAA
CCAAGCTTACAGAACGGATCGCTTACTTCCTCCAAGGCAGATCGGGTTGGCGAAGTCGAATTTAGAAATGTCAGCTTCAA
ATATCCTGATGCAGAGGATTATGTTGTAGAGGACATCAGTTTTACGGCAAAAAGAGGAGAAACCGTGGCATTTATCGGTT
CAACCGGATGCGGAAAAAGTACCGTTGTTAACCTGATCCCCCGCTTTTATGATGCTACAGCAGGTGAGGTGCTGGTGGAT
GGTATCAATGTCAACCAATACGAGCAAAGTGCGCTGCGAAACAAAATAGGATATGTATCCCAAAAAGCGATTTTGTTTGG
CGGTACGGTAAGCTCCAACGTTGCTTTTGGTGATAACGGAAGTAATCTTGCATCTGATGTCGTTGATGCCGTTTATACCT
CTCAAGCTTCGGATTTTGTAGAAAAGATGGACGGCAGCTACGAGGCCCATGTCGCCCAAGGCGGTTCGAACCTGTCCGGC
GGGCAAAAACAGCGTCTGTCCATTGCCCGGGCCATTGCGCGCCGTCCTGAAATATTGATCTTCGACGATTCCTTCTCAGC
CCTTGATTATAAGACAGACCGCAAATTGCGCAGTGAGCTGAAGAAAGAAGCCCGCGGCACTACGATGCTGATTGTTGCCC
AACGAATCGGCACAATTAAAGACGCGGACAAAATTATTGTACTGGAAGCTGGACGTGTGGCAGGCATGGGGACACATGAT
GAATTAATGCAGTCCTGCAGTATCTACCAAGAAATTGCCTACTCACAACTTTCCAAGGAGGAGCTGGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A089I2N5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.013

100

0.532


Multiple sequence alignment