Detailed information
Overview
| Name | waaF | Type | Regulator |
| Locus tag | CR44_RS06845 | Genome accession | NZ_CP009226 |
| Coordinates | 1398097..1399041 (+) | Length | 314 a.a. |
| NCBI ID | WP_039362751.1 | Uniprot ID | A0AAX0HDB2 |
| Organism | Campylobacter fetus subsp. testudinum strain pet-3 isolate pet-3-1 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1393097..1404041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR44_RS06825 (CR44_06930) | - | 1393743..1394798 (-) | 1056 | WP_023385763.1 | glycosyltransferase family 4 protein | - |
| CR44_RS06830 (CR44_06935) | - | 1394795..1395715 (-) | 921 | WP_023385764.1 | glycosyltransferase family 9 protein | - |
| CR44_RS06835 (CR44_06940) | - | 1395690..1396994 (-) | 1305 | WP_023385765.1 | hypothetical protein | - |
| CR44_RS06840 (CR44_06945) | - | 1397082..1398113 (+) | 1032 | WP_039362748.1 | glycosyltransferase family 4 protein | - |
| CR44_RS06845 (CR44_06950) | waaF | 1398097..1399041 (+) | 945 | WP_039362751.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| CR44_RS06850 (CR44_06955) | gmhA | 1399007..1399570 (-) | 564 | WP_023385769.1 | D-sedoheptulose 7-phosphate isomerase | - |
| CR44_RS06855 (CR44_06960) | rfaE1 | 1399573..1400949 (-) | 1377 | WP_023385770.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| CR44_RS06860 (CR44_06965) | rfaD | 1400942..1401910 (-) | 969 | WP_023385772.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| CR44_RS06865 (CR44_06970) | gmhB | 1401907..1402413 (-) | 507 | WP_023385774.1 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase | - |
| CR44_RS06870 (CR44_06975) | - | 1402544..1402858 (+) | 315 | WP_023385776.1 | c-type cytochrome | - |
Sequence
Protein
Download Length: 314 a.a. Molecular weight: 35717.85 Da Isoelectric Point: 9.3438
>NTDB_id=127379 CR44_RS06845 WP_039362751.1 1398097..1399041(+) (waaF) [Campylobacter fetus subsp. testudinum strain pet-3 isolate pet-3-1]
MRILIELPTWLGDAVMASAAVQSLALNYPNCKITFFGSEISTSIYSSYPNCENIIIDNSKKAKFRLFYLLKTALNLDKFD
IAVSFRSHFYSKVFFKFIKADKKAIFTPTKNEIHQVQKYMNFIINCLSLKQSIDELKLYFAPFKFKNKTLGLNPGASYGS
AKRWYPQYFADVAINLKKSYEVVIFGGKNEQNICDEIALELEKNGVKYQNLCNKTTICELASFIAGLDMFITNDSGPMHI
AAAFKVPTIALFGPTKFKETSPYKNNNAKILHLDLDCMPCMKRVCPLNSHECMKNLTPKMVLDAIYKLNPQLDK
MRILIELPTWLGDAVMASAAVQSLALNYPNCKITFFGSEISTSIYSSYPNCENIIIDNSKKAKFRLFYLLKTALNLDKFD
IAVSFRSHFYSKVFFKFIKADKKAIFTPTKNEIHQVQKYMNFIINCLSLKQSIDELKLYFAPFKFKNKTLGLNPGASYGS
AKRWYPQYFADVAINLKKSYEVVIFGGKNEQNICDEIALELEKNGVKYQNLCNKTTICELASFIAGLDMFITNDSGPMHI
AAAFKVPTIALFGPTKFKETSPYKNNNAKILHLDLDCMPCMKRVCPLNSHECMKNLTPKMVLDAIYKLNPQLDK
Nucleotide
Download Length: 945 bp
>NTDB_id=127379 CR44_RS06845 WP_039362751.1 1398097..1399041(+) (waaF) [Campylobacter fetus subsp. testudinum strain pet-3 isolate pet-3-1]
ATGCGCATACTAATTGAGCTGCCCACATGGCTAGGTGACGCCGTGATGGCAAGCGCTGCTGTTCAAAGTCTAGCCCTAAA
CTATCCAAACTGTAAGATAACCTTTTTTGGATCAGAGATTAGCACGAGTATCTACAGCTCTTATCCAAACTGTGAAAATA
TCATTATCGATAATTCAAAAAAAGCTAAGTTCAGACTGTTTTATCTGCTAAAAACAGCTTTAAATTTAGATAAATTTGAT
ATAGCCGTAAGTTTTAGAAGTCACTTTTACTCAAAAGTATTTTTTAAATTTATAAAAGCAGACAAAAAAGCTATTTTTAC
ACCTACAAAAAACGAAATTCATCAGGTACAAAAATATATGAATTTTATTATCAATTGTCTGAGTTTAAAACAAAGCATAG
ATGAGCTAAAACTGTATTTTGCTCCTTTTAAATTTAAAAACAAAACTCTAGGGCTAAATCCAGGAGCAAGCTATGGAAGC
GCGAAAAGATGGTATCCGCAGTACTTTGCAGATGTAGCTATAAATTTAAAAAAGAGTTATGAAGTTGTCATTTTTGGAGG
AAAAAATGAACAAAATATCTGCGACGAAATAGCATTAGAACTTGAAAAAAACGGAGTAAAATACCAAAATTTATGTAACA
AAACCACTATTTGTGAGCTAGCAAGCTTTATAGCAGGTCTTGATATGTTTATCACTAACGATAGCGGTCCTATGCACATA
GCAGCAGCTTTTAAAGTGCCTACTATAGCACTTTTTGGACCTACTAAGTTCAAAGAAACCTCTCCATATAAAAATAACAA
TGCAAAGATACTACATCTTGATTTAGACTGTATGCCCTGTATGAAGAGAGTTTGTCCTTTAAACTCACACGAATGTATGA
AAAATCTAACACCAAAAATGGTGTTAGATGCTATTTATAAGCTAAATCCACAGCTTGACAAATAG
ATGCGCATACTAATTGAGCTGCCCACATGGCTAGGTGACGCCGTGATGGCAAGCGCTGCTGTTCAAAGTCTAGCCCTAAA
CTATCCAAACTGTAAGATAACCTTTTTTGGATCAGAGATTAGCACGAGTATCTACAGCTCTTATCCAAACTGTGAAAATA
TCATTATCGATAATTCAAAAAAAGCTAAGTTCAGACTGTTTTATCTGCTAAAAACAGCTTTAAATTTAGATAAATTTGAT
ATAGCCGTAAGTTTTAGAAGTCACTTTTACTCAAAAGTATTTTTTAAATTTATAAAAGCAGACAAAAAAGCTATTTTTAC
ACCTACAAAAAACGAAATTCATCAGGTACAAAAATATATGAATTTTATTATCAATTGTCTGAGTTTAAAACAAAGCATAG
ATGAGCTAAAACTGTATTTTGCTCCTTTTAAATTTAAAAACAAAACTCTAGGGCTAAATCCAGGAGCAAGCTATGGAAGC
GCGAAAAGATGGTATCCGCAGTACTTTGCAGATGTAGCTATAAATTTAAAAAAGAGTTATGAAGTTGTCATTTTTGGAGG
AAAAAATGAACAAAATATCTGCGACGAAATAGCATTAGAACTTGAAAAAAACGGAGTAAAATACCAAAATTTATGTAACA
AAACCACTATTTGTGAGCTAGCAAGCTTTATAGCAGGTCTTGATATGTTTATCACTAACGATAGCGGTCCTATGCACATA
GCAGCAGCTTTTAAAGTGCCTACTATAGCACTTTTTGGACCTACTAAGTTCAAAGAAACCTCTCCATATAAAAATAACAA
TGCAAAGATACTACATCTTGATTTAGACTGTATGCCCTGTATGAAGAGAGTTTGTCCTTTAAACTCACACGAATGTATGA
AAAATCTAACACCAAAAATGGTGTTAGATGCTATTTATAAGCTAAATCCACAGCTTGACAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
48.243 |
99.682 |
0.481 |