Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   ASU1_RS11325 Genome accession   NZ_CP009159
Coordinates   2430453..2430743 (+) Length   96 a.a.
NCBI ID   WP_005621656.1    Uniprot ID   K0G7F8
Organism   Actinobacillus suis ATCC 33415     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2425453..2435743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU1_RS11305 (ASU1_11025) rsmI 2426606..2427460 (+) 855 WP_015674480.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ASU1_RS11310 (ASU1_11030) - 2427504..2428073 (-) 570 WP_005608594.1 elongation factor P hydroxylase -
  ASU1_RS11315 (ASU1_11035) - 2428132..2429883 (-) 1752 WP_015674481.1 protein-disulfide reductase DsbD -
  ASU1_RS11320 (ASU1_11040) - 2430101..2430472 (+) 372 WP_005621659.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ASU1_RS11325 (ASU1_11045) HI0659 2430453..2430743 (+) 291 WP_005621656.1 helix-turn-helix transcriptional regulator Machinery gene
  ASU1_RS11330 (ASU1_11050) - 2430811..2431773 (-) 963 WP_015674482.1 calcium/sodium antiporter -
  ASU1_RS11335 (ASU1_11055) - 2431846..2432343 (+) 498 WP_015674483.1 YbhB/YbcL family Raf kinase inhibitor-like protein -
  ASU1_RS11340 (ASU1_11060) artP 2432571..2433305 (+) 735 WP_015674484.1 arginine ABC transporter ATP-binding protein ArtP -
  ASU1_RS11345 (ASU1_11065) - 2433325..2434044 (+) 720 WP_015674485.1 transporter substrate-binding domain-containing protein -
  ASU1_RS11350 (ASU1_11070) artQ 2434050..2434721 (+) 672 WP_015674486.1 arginine ABC transporter permease ArtQ -
  ASU1_RS11355 (ASU1_11075) artM 2434721..2435404 (+) 684 WP_015674487.1 arginine ABC transporter permease ArtM -

Sequence


Protein


Download         Length: 96 a.a.        Molecular weight: 10803.58 Da        Isoelectric Point: 8.7274

>NTDB_id=127165 ASU1_RS11325 WP_005621656.1 2430453..2430743(+) (HI0659) [Actinobacillus suis ATCC 33415]
MSPIGSSWTSFEREVFNELEMEENHFRVKLILEIIETRQALGISQRKLEKLSGVKQSMIARVEKGSSNPSLGTLLKLLVP
LGKTLQIVPLDDTHSK

Nucleotide


Download         Length: 291 bp        

>NTDB_id=127165 ASU1_RS11325 WP_005621656.1 2430453..2430743(+) (HI0659) [Actinobacillus suis ATCC 33415]
ATGAGCCCCATTGGTTCTAGTTGGACATCATTTGAACGAGAAGTGTTTAATGAGTTGGAAATGGAAGAAAACCATTTTCG
TGTTAAATTGATTCTTGAAATTATTGAGACCCGACAGGCGTTAGGTATTTCACAACGTAAATTAGAAAAACTAAGTGGCG
TAAAACAATCGATGATAGCCCGGGTTGAAAAGGGAAGCTCCAATCCTTCTCTTGGTACGTTACTAAAATTACTGGTGCCG
CTGGGGAAAACATTACAAATCGTGCCTTTAGACGATACTCATTCTAAATAA

Domains


Predicted by InterproScan.

(35-86)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K0G7F8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

65.556

93.75

0.615


Multiple sequence alignment