Detailed information NTG0127076

Bioinformatically predicted

Overview

• Name: eppA
• Type: Machinery gene
• Locus tag: JH146_RS05435
• Genome accession: NZ_CP009149
• Coordinates: 1065208..1066227 (+)
• Length: 339 a.a.
• NCBI ID: WP_048202047.1
• Uniprot ID: -
• Organism: Methanocaldococcus bathoardescens strain JH146
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1060208..1071227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JH146_RS05400 (JH146_1062)	mfnF	1060814..1061797 (-)	984	WP_173400825.1	(4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase	-
JH146_RS05405 (JH146_1063)	priS	1061879..1062940 (+)	1062	WP_048202043.1	DNA primase catalytic subunit PriS	-
JH146_RS05410 (JH146_1064)	-	1063010..1063672 (-)	663	WP_048202044.1	DUF166 domain-containing protein	-
JH146_RS05425 (JH146_1065)	mptB	1064022..1064771 (-)	750	WP_048202045.1	dihydroneopterin 2',3'-cyclic phosphate phosphodiesterase	-
JH146_RS05430 (JH146_1066)	-	1064844..1065203 (+)	360	WP_048202046.1	cysteine-rich small domain-containing protein	-
JH146_RS05435 (JH146_1067)	eppA	1065208..1066227 (+)	1020	WP_048202047.1	A24 family peptidase C-terminal domain-containing protein	Machinery gene
JH146_RS05440 (JH146_1068)	-	1066240..1066644 (+)	405	WP_048202048.1	class III signal peptide-containing protein	-
JH146_RS05445 (JH146_1069)	-	1066691..1067821 (+)	1131	WP_048202049.1	DUF515 domain-containing protein	-
JH146_RS05450 (JH146_1070)	-	1067975..1068712 (+)	738	WP_236953653.1	hypothetical protein	-
JH146_RS05455 (JH146_1071)	-	1068737..1069165 (+)	429	WP_048202051.1	class III signal peptide-containing protein	-

Sequence

Protein

• Length: 339 a.a.
• Molecular weight: 39217.73 Da
• Isoelectric Point: 9.1586

>NTDB_id=127076 JH146_RS05435 WP_048202047.1 1065208..1066227(+) (eppA) [Methanocaldococcus bathoardescens strain JH146]
MDLLNIVYIVNFILLILASITDIKERIIPHKYTIAMIIMNLTVGYYYFGLDVIIAFFSTLILCLILSVGMGGGDVKLFTA
LAPIFAYPDSFVFYIPKYILYLIAISMLIAAVFPMFKILIRYWKDILPSACYLTMILGVLYYFIHIYKIPYASIIIWAYI
ILSIFISRKIPKYKEYTKKLGYLFPVYLLFLYIVDKSYFIKYNVLITSIIYLCEIILISIVIYALTGVEISDKKHVKELK
EGDILRDVIIIDKDGVEVKNLNIIKRIKLLLEHEIKKDGKEIILTDGEGLSNEDIQKIKKLYMEGKIPDKLNIIKTYPFV
PFVVVGYLITLMLMFSSII

Nucleotide

• Length: 1020 bp

>NTDB_id=127076 JH146_RS05435 WP_048202047.1 1065208..1066227(+) (eppA) [Methanocaldococcus bathoardescens strain JH146]
GTGGATTTGTTAAATATAGTTTATATTGTTAACTTTATTTTACTTATTTTGGCATCAATAACAGATATTAAGGAGAGAAT
TATCCCACACAAATACACAATTGCCATGATTATAATGAACTTAACTGTTGGTTATTACTATTTTGGACTTGATGTAATTA
TTGCGTTTTTCTCTACGTTAATATTATGTTTAATATTAAGTGTTGGAATGGGAGGAGGAGATGTTAAGCTATTTACAGCC
TTAGCCCCTATTTTTGCATATCCTGATTCTTTTGTATTTTATATTCCAAAATATATTCTCTACTTAATAGCAATCAGCAT
GCTTATTGCTGCAGTTTTTCCAATGTTTAAAATTTTAATAAGATATTGGAAAGACATTTTACCCTCAGCTTGTTATTTGA
CTATGATTCTTGGTGTATTATACTATTTTATACATATTTATAAAATTCCATACGCTTCAATAATTATATGGGCTTATATC
ATCCTCTCCATATTTATTTCAAGAAAAATTCCAAAATATAAAGAATATACAAAAAAATTAGGTTATTTATTCCCTGTTTA
TTTGTTATTTCTCTATATTGTTGATAAATCCTATTTTATTAAATACAACGTACTAATAACGTCCATAATATACCTCTGCG
AAATAATACTAATATCTATAGTTATTTATGCCCTCACAGGTGTAGAAATTTCCGATAAAAAACATGTTAAAGAGTTAAAA
GAAGGAGATATTTTAAGAGACGTAATAATTATAGACAAAGATGGTGTTGAAGTAAAAAACTTAAATATTATAAAAAGAAT
AAAACTCCTATTAGAACATGAAATTAAAAAAGATGGAAAAGAAATAATATTAACTGATGGAGAAGGGCTGTCCAATGAAG
ACATCCAAAAAATAAAAAAACTCTACATGGAAGGAAAAATTCCAGATAAATTAAATATTATAAAGACCTATCCATTTGTT
CCATTTGTCGTTGTTGGTTATTTAATTACTCTAATGTTAATGTTCTCATCTATAATCTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (9-114)

• Archaeal Peptidase A24 C-terminal Domain (Arc_PepC) (208-313)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
eppA	Methanococcus maripaludis strain DSM 2067	54.848	97.345	0.534