Detailed information NTG0126967

Bioinformatically predicted

Overview

• Name: pilN
• Type: Machinery gene
• Locus tag: YQ19_RS32365
• Genome accession: NZ_CP011317
• Coordinates: 6836517..6837113 (-)
• Length: 198 a.a.
• NCBI ID: WP_015647905.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain Carb01 63
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6831517..6842113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YQ19_RS32345 (YQ19_32340)	aroK	6832648..6833166 (-)	519	WP_003095833.1	shikimate kinase AroK	-
YQ19_RS32350 (YQ19_32345)	pilQ	6833178..6835322 (-)	2145	WP_003146401.1	type 4a pilus secretin PilQ	Machinery gene
YQ19_RS32355 (YQ19_32350)	comL/pilP	6835376..6835900 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	Machinery gene
YQ19_RS32360 (YQ19_32355)	pilO	6835897..6836520 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	Machinery gene
YQ19_RS32365 (YQ19_32360)	pilN	6836517..6837113 (-)	597	WP_015647905.1	type 4a pilus biogenesis protein PilN	Machinery gene
YQ19_RS32370 (YQ19_32365)	pilM	6837113..6838177 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
YQ19_RS32375 (YQ19_32370)	-	6838362..6840830 (+)	2469	WP_025297613.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 22199.52 Da
• Isoelectric Point: 10.0895

>NTDB_id=126967 YQ19_RS32365 WP_015647905.1 6836517..6837113(-) (pilN) [Pseudomonas aeruginosa strain Carb01 63]
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAVENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK

Nucleotide

• Length: 597 bp

>NTDB_id=126967 YQ19_RS32365 WP_015647905.1 6836517..6837113(-) (pilN) [Pseudomonas aeruginosa strain Carb01 63]
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCGTCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ATAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA

Domains

Predicted by InterProScan.

• Fimbrial assembly protein (PilN) (PilN) (100-177)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilN	Legionella pneumophila strain ERS1305867	41.143	88.384	0.364