Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ID12_RS11580 Genome accession   NZ_CP009108
Coordinates   2300725..2301306 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain GR-8     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2295725..2306306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID12_RS11555 (ID12_12035) - 2296390..2297568 (+) 1179 WP_046527697.1 N-acetyldiaminopimelate deacetylase -
  ID12_RS11560 (ID12_12040) - 2297619..2297861 (+) 243 WP_003211408.1 YkuS family protein -
  ID12_RS11565 (ID12_12045) - 2297886..2298695 (-) 810 WP_050827221.1 mechanosensitive ion channel family protein -
  ID12_RS11570 (ID12_12050) ahpA 2298967..2299509 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  ID12_RS11575 (ID12_12055) - 2299785..2300243 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  ID12_RS11580 (ID12_12060) rok 2300725..2301306 (+) 582 WP_007498648.1 hypothetical protein Regulator
  ID12_RS11585 (ID12_12065) - 2301369..2302286 (-) 918 WP_025207264.1 hypothetical protein -
  ID12_RS11590 (ID12_12070) - 2302370..2302951 (+) 582 WP_017359414.1 molybdenum cofactor guanylyltransferase -
  ID12_RS11595 (ID12_12075) - 2302981..2303997 (+) 1017 WP_050827223.1 MoeB/ThiF family adenylyltransferase -
  ID12_RS11600 (ID12_12080) glp 2304007..2305281 (+) 1275 WP_048001602.1 gephyrin-like molybdotransferase Glp -
  ID12_RS11605 (ID12_12085) mobB 2305263..2305790 (+) 528 WP_046527034.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ID12_RS11610 (ID12_12090) - 2305783..2306274 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=126870 ID12_RS11580 WP_007498648.1 2300725..2301306(+) (rok) [Bacillus altitudinis strain GR-8]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=126870 ID12_RS11580 WP_007498648.1 2300725..2301306(+) (rok) [Bacillus altitudinis strain GR-8]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGTGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment